Evidence map›Paper›PMID 41035503›Full record

ArticleComputational and structural biotechnology journal2025

Discovery of diverse chimeric peptides in a eukaryotic proteome sets the stage for experimental validation of the mosaic translation hypothesis.

Umut Çakır, Noujoud Gabed, Yunus Emre Köroğlu, Selen Kaya, Senjuti Sinharoy, Vagner A Benedito, Marie Brunet, Xavier Roucou, Igor S Kryvoruchko

Abstract read
In one paragraph

Article in Computational and structural biotechnology journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Umut ÇakırClinical Neuroscience Research Group, Max Planck Institute for Multidisciplinary Sciences, The University of Göttingen, Göttingen 37075, Germany.
Noujoud GabedCellular and Molecular Biology Department, Oran High School of Biological Sciences (ESSBO), Oran 31000, Algeria.
Yunus Emre KöroğluDepartment of Molecular Biology and Genetics, Boğaziçi University, Istanbul 34342, Turkey.
Selen KayaDepartment of Molecular Biology and Genetics, Çanakkale Onsekiz Mart University, Çanakkale 17020, Turkey.
Senjuti SinharoyBRIC-National Institute of Plant Genome Research, New Delhi 110 067, India.
Vagner A BeneditoSchool of Agriculture and Natural Sciences, University of Maryland Eastern Shore, Princess Anne, MD 21853, USA.
Marie BrunetDepartment of Pediatrics, Medical Genetics Service, Université de Sherbrooke, Sherbrooke, QC J1E4K8, Canada.
Xavier RoucouCentre de Recherche du Centre Hospitalier Universitaire de Sherbrooke (CRCHUS), Sherbrooke, QC J1E4K8, Canada.
Igor S KryvoruchkoDepartment of Biology, United Arab Emirates University, P.O. Box 15551, Al Ain, UAE.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The high complexity of eukaryotic organisms enabled their evolutionary success, driven by the diversification of their proteomes. Various mechanisms contributed to this process. Alternative splicing had the largest known impact among these mechanisms. Earlier, we hypothesized that along with alternative splicing, a different but conceptually similar mechanism creates novel versions of existing proteins in all eukaryotes. However, this mechanism operates at the level of translation, where amino acid sequence novelty arises through multiple programmed ribosomal frameshifting events occurring within the same transcript. This mechanism, which is termed mosaic translation, is very difficult to demonstrate even with the most up-to-date molecular tools. Thus, it remained unnoticed so far. Using a subset of mass spectrometry proteomic data from various organs of the model plant

Indexed as

Alternative open reading frameChimeric peptideElongation factorMosaic translationProgrammed ribosomal frameshiftingRuBisCo

Identifiers

PMID41035503
PMCPMC12481079

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.