Evidence map›Paper›PMID 41035332›Full record

ArticlePhilosophical transactions of the Royal Society of London. Series B, Biological sciences2025

Before LUCA: unearthing the chemical roots of metabolism.

Pablo Carbonell, Juli Peretó

Abstract read
In one paragraph

Article in Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Can the origin of biosynthetic routes be explained by a Frankenstein's monster-like spontaneous assembly of prebiotic reactants?Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Article
  3. Origins of life: the possible and the actual.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Pablo CarbonellInstitute for Integrative Systems Biology I2SysBio (Universitat de València-CSIC), Paterna 46980, Spain.ORCID 0000-0002-0993-5625
Juli PeretóInstitute for Integrative Systems Biology I2SysBio (Universitat de València-CSIC), Paterna 46980, Spain.ORCID 0000-0002-5756-1517

Funding

Conselleria de Innovación, Universidades, Ciencia y Sociedad Digital, Generalitat ValencianaEuropean Union NextGenerationEU/PRTRMinisterio de Ciencia, Innovación y Universidades
6 · The paper itself

Abstract

The transition from geochemistry to biochemistry marks a fundamental event in the emergence of life. Recent advancements in computational methods and systems chemistry offer new insights into how primitive biochemical systems evolved. While early Earth chemistry laid the foundation for protometabolic processes, linking these to the more complex metabolic capabilities of last universal common ancestor (LUCA) remains a challenge. Here, we propose potential solutions by mapping reaction rules from LUCA's metabolism to prebiotic reactions, enabling the exploration of possible connections between abiotic chemistry and early life. A comprehensive modelling framework is proposed to test these hypotheses, incorporating factors such as thermodynamics, planetary conditions and the availability of key reactants. Additionally, the role of enzyme promiscuity and metabolic evolvability is discussed as a driving force in the transition from early chemistry to life. By leveraging generative models, this research paves the way for future synthetic biology applications, potentially expanding our understanding of metabolism and its evolutionary origins.This article is part of the theme issue 'Origins of life: the possible and the actual'.

Indexed as

Biological EvolutionOrigin of Lifeenzyme promiscuitygenerative metabolismLUCAprebiotic chemistryprotometabolismsystems chemistry

Identifiers

PMID41035332
PMCPMC12489507

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.