Evidence map›Paper›PMID 41034841›Full record

ArticleBMC pulmonary medicine2025

Bronchoalveolar lavage proteomics in exacerbation of bronchiectasis.

Ju Yeon Lee, Jiyoul Yang, Jin Young Kim, Yeji Do, Min-Sik Kim, Dong Eun Kye, Geonhui Min, In-Sook Jeon, Eung-Gook Kim, Joong Kook Choi and 3 more

Abstract read
In one paragraph

Article in BMC pulmonary medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Ju Yeon Lee *Digital Omics Research Center, Korea Basic Science Institute, Ochang, Republic of Korea.
Jiyoul Yang *Division of Pulmonary and Critical Care Medicine, Department of Internal Medicine, Chungbuk National University Hospital, Chungbuk National University College of Medicine, Cheongju, 28644, Republic of Korea.
Jin Young KimDigital Omics Research Center, Korea Basic Science Institute, Ochang, Republic of Korea.
Yeji DoDepartment of New Biology, DGIST, Daegu, Republic of Korea.
Min-Sik KimDepartment of New Biology, DGIST, Daegu, Republic of Korea.
Dong Eun KyeChungbuk National University College of Medicine, Cheongju, Republic of Korea.
Geonhui MinDepartment of Chemistry, College of Natural Sciences, Chungbuk National University, Cheongju, Republic of Korea.
In-Sook JeonChungbuk National University College of Medicine, Cheongju, Republic of Korea.
Eung-Gook KimChungbuk National University College of Medicine, Cheongju, Republic of Korea.
Joong Kook ChoiChungbuk National University College of Medicine, Cheongju, Republic of Korea.
Minjae ChoiMedical Artificial Intelligence Center, Chungbuk National University Hospital, Cheongju, Republic of Korea.
Hyun Lee *Division of Pulmonary Medicine and Allergy, Department of Internal Medicine, Hanyang University College of Medicine, 222-1, Wangsimni-ro, Seoul, Seongdong-gu, 04763, Republic of Korea. namuhanayeyo@naver.com.
Bumhee Yang *Division of Pulmonary and Critical Care Medicine, Department of Internal Medicine, Chungbuk National University Hospital, Chungbuk National University College of Medicine, Cheongju, 28644, Republic of Korea. ybhworld0415@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe molecular pathophysiology underlying the development of bronchiectasis with exacerbation at the proteomic level has not been clarified using bronchoalveolar lavage fluid samples. This study aimed to evaluate the bronchoalveolar lavage fluid inflammatory profiles associated with exacerbation of bronchiectasis.

methodsWe analyzed the bronchoalveolar lavage fluid specimens from 4 patients in the exacerbation status and 4 patients in a stable status using liquid chromatography-tandem mass spectrometry.

resultsA total of 1,577 proteins were identified using proteomic analysis, with 127 differentially expressed proteins. Of 127 differentially expressed proteins, 23 proteins showed more than 2-fold differences between exacerbation and stable status groups. The exacerbation status was associated with 18 upregulated proteins (TPI1, CRP, BPI, ORM1, PTPRE, S100A9, BPY2, TPM4, ERVFC1-1, CYS1, CLEC3B, S100A8, PSAT1, NDUFA10, MDGA1, SPRR3, ALDOA, and PSMB2) and five downregulated proteins (MUC5B, HSPE1, KLK13, IGHA1, and MUC5AC). Pathway analysis revealed that the neutrophil degranulation pathway (R-HSA-6798695) was the most enriched pathway in these proteins, followed by the C-type lectin receptor pathway (R-HSA-5621481).

conclusionThe bronchoalveolar lavage fluid protein expression in patients in the exacerbation status of bronchiectasis was significantly different from that in patients in the stable status, indicating that neutrophil degranulation and C-type lectin receptor pathways are the most enriched pathways during exacerbation.

Indexed as

BronchiectasisBronchoalveolar Lavage FluidProteomicsAgedChromatography, LiquidDisease ProgressionFemaleHumansMaleMiddle AgedTandem Mass SpectrometryBronchiectasisBronchoalveolar lavageNeutrophil degranulationProteomics

Identifiers

PMID41034841
PMCPMC12487217

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.