Evidence map›Paper›PMID 41034318›Full record

ArticleScientific reports2025

Helicobacter pylori antimicrobial resistance and gene variants in Shandong Province.

Zhijing Xue, Qi Zhao, Fengyan Pei, Yanan Gong, Fang Wang, Youjun Wang, Qing Chen, Yanran Li, Qingqing Xu, Juanjuan Tian and 3 more

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Antibiotics (Basel, Switzerland) · 2026
    Review
  3. Association of Resistance-AssociatedAntibiotics (Basel, Switzerland) · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Antibiotic resistance and associated gene mutations ofFrontiers in cellular and infection microbiology · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Zhijing XueDepartment of Gastroenterology, Central Hospital Affiliated to Shandong First Medical University, Jinan, 250013, Shandong, China. 573799518@qq.com.
Qi ZhaoDepartment of Gastroenterology, Central Hospital Affiliated to Shandong First Medical University, Jinan, 250013, Shandong, China.
Fengyan PeiMedical Research & Laboratory Diagnostic Center, Central Hospital Affiliated to Shandong First Medical University, Jinan, 250013, Shandong, China.
Yanan GongNational Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, 102206, China.
Fang WangDepartment of Gastroenterology, Central Hospital Affiliated to Shandong First Medical University, Jinan, 250013, Shandong, China.
Youjun WangDepartment of Gastroenterology, Central Hospital Affiliated to Shandong First Medical University, Jinan, 250013, Shandong, China.
Qing ChenDepartment of Gastroenterology, Central Hospital Affiliated to Shandong First Medical University, Jinan, 250013, Shandong, China.
Yanran LiDepartment of Gastroenterology, Central Hospital Affiliated to Shandong First Medical University, Jinan, 250013, Shandong, China.
Qingqing XuDepartment of Gastroenterology, Central Hospital Affiliated to Shandong First Medical University, Jinan, 250013, Shandong, China.
Juanjuan TianMedical Research & Laboratory Diagnostic Center, Central Hospital Affiliated to Shandong First Medical University, Jinan, 250013, Shandong, China.
Ying LiuMedical Research & Laboratory Diagnostic Center, Central Hospital Affiliated to Shandong First Medical University, Jinan, 250013, Shandong, China.
Yan ZhengDepartment of Gastroenterology, Central Hospital Affiliated to Shandong First Medical University, Jinan, 250013, Shandong, China. 8793822@qq.com.
Guohai SuResearch Center of Translational Medicine, Central Hospital Affiliated to Shandong First Medical University, Jinan, 250013, Shandong, China. gttstg@163.com.

Funding

Jinan Clinical Medical Science and Technology Innovation Program 202328036Natural Science Foundation of Shandong Province ZR2021QC219Shandong Medical and Health Science and Technology Development Plan Project 202202080452
6 · The paper itself

Abstract

The emergence of antibiotic resistance in Helicobacter pylori led to a sharp decline in eradication rates, but there are limited data regarding the prevalence and genetic mechanisms of antibiotic resistance in Shandong. This study aims to assess the prevalence and molecular mechanisms of H. pylori antibiotic resistance to commonly used antibiotics in Shandong populations. Antimicrobial susceptibility testing was performed for clarithromycin, levofloxacin, metronidazole, tetracycline, rifampicin, amoxicillin, azithromycin, and moxifloxacin using E-test method. PCR amplified resistance-associated genes for all the strains, and 32 were whole-genome sequenced. 62 H. pylori strains were obtained and the infection rate was 30.1% (62/206). No resistance to amoxicillin was observed. Two and four strains were resistant to tetracycline and rifampicin, respectively, and no resistance-associated mutations were found in the 16S rRNA and rpoB genes. The resistance rates of azithromycin, clarithromycin, levofloxacin, and moxifloxacin were 56.45% (35/62), 33.87% (21/62), 48.39% (30/62), and 56.45% (35/62), respectively. The percentages of dual, triple, and quadruple resistance were 32.26% (20/62), 24.19% (15/62), and 1.61% (1/62), respectively, and only one isolate was resistant to quadruple antibiotics. Phenotypic resistance associated with the A2143G mutations in 23S rRNA for azithromycin and clarithromycin (kappa coefficient, 0.808 and 0.671, respectively), and gyrA mutations (N87K/N87I/D91G/D91Y/D91N) for levofloxacin and moxifloxacin (kappa coefficient, 0.526 and 0.442, respectively). Metronidazole resistance was observed in 43.55% (27/62) isolates and most of the metronidazole-resistant strains had truncated rdxA and frxA. The detection of a truncated rdxA gene correlated with phenotypic resistance results (kappa coefficient, 0.728). There was no association between whole-genome phylogeny and antibiotic resistance profiles. Our results revealed the high resistance rates and multiple resistance of H. pylori to commonly used antibiotics. Continued surveillance of H. pylori antibiotic resistance is crucial in Shandong to establish effective eradication therapy for this population.

Indexed as

Anti-Bacterial AgentsDrug Resistance, BacterialDrug Resistance, Multiple, BacterialHelicobacter InfectionsHelicobacter pyloriAdultBacterial ProteinsChinaClarithromycinFemaleHumansMaleMicrobial Sensitivity TestsMiddle AgedMoxifloxacinMutationAnti-Bacterial AgentsBacterial ProteinsClarithromycinMoxifloxacinRNA, Ribosomal, 16SAntimicrobial susceptibility testingGenetic mutationHelicobacter pyloriShandongWhole-genome sequencing

Identifiers

PMID41034318
PMCPMC12489142

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