Evidence map›Paper›PMID 41032499›Full record

ArticlePloS one2025

Bacteria isolated from the grape phyllosphere capable of degrading guaiacol, a main volatile phenol associated with smoke taint in wine.

Claudia Castro, Jacquelyn Badillo, Melissa Tumen-Velasquez, Adam M Guss, Thomas S Collins, Frank Harmon, Devin Coleman-Derr

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Claudia CastroPlant Gene Expression Center, United States of America Department of Agriculture - Agricultural Research Service, Albany, California, United States of America.ORCID https://orcid.org/0000-0002-5164-1356
Jacquelyn BadilloDepartment of Molecular and Cell Biology, University of California, Merced, Merced, California, United States of America.
Melissa Tumen-VelasquezBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America.
Adam M GussBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America.
Thomas S CollinsViticulture and Enology Program, Washington State University, Richland, Washington, United States of America.
Frank HarmonPlant Gene Expression Center, United States of America Department of Agriculture - Agricultural Research Service, Albany, California, United States of America.
Devin Coleman-DerrPlant Gene Expression Center, United States of America Department of Agriculture - Agricultural Research Service, Albany, California, United States of America.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent wildfires near vineyards in the Pacific United States have caused devastating financial losses due to smoke taint in wine. When wine grapes (Vitis vinifera) are exposed to wildfire smoke, their berries absorb volatile phenols derived from the lignin of burning plant material. Volatile phenols are released during the winemaking process giving the finished wine an unpleasant, smokey, and ashy taste known as smoke taint. Bacteria are capable of undergoing a wide variety of metabolic processes and therefore present great potential for bioremediation applications in many industries. In this study, we identify two strains of the same species that colonize the grape phyllosphere and are able to degrade guaiacol, a main volatile phenol responsible for smoke taint in wine. We identify the suite of genes that enable guaiacol degradation in Gordonia alkanivorans via RNAseq of cells growing on guaiacol as a sole carbon source. Additionally, we knockout guaA, a cytochrome P450 gene involved in the conversion of guaiacol to catechol; ΔguaA cells cannot catabolize guaiacol in vitro, providing evidence that GuaA is necessary for this process. Furthermore, we analyze the microbiome of berries and leaves exposed to smoke in the vineyard to investigate the impact of smoke on the grape microbial community. We found smoke has a significant but small effect on the microbial community, leading to an enrichment of several genera belonging to the Bacilli class. Collectively, this research shows that studying microbes and their enzymes has the potential to identify novel tools for alleviating smoke taint.

Indexed as

Gordonia BacteriumGuaiacolSmokeVitisWineBiodegradation, EnvironmentalGuaiacolSmoke

Identifiers

PMID41032499
PMCPMC12488008

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.