Evidence map›Paper›PMID 41029441›Full record

ArticleGenome biology2025

G-quadruplex structural motifs modulate protein-RNA interactions within the transcriptome.

Uditi Bhatt, Cameron W Evans, Anne Cucchiarini, Julien Gros, K Swaminathan Iyer, Jean-Louis Mergny, Nicole M Smith

Abstract read
In one paragraph

Article in Genome biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Uditi BhattSchool of Molecular Sciences, The University of Western Australia, Crawley, WA, 6009, Australia.
Cameron W EvansSchool of Molecular Sciences, The University of Western Australia, Crawley, WA, 6009, Australia.
Anne CucchiariniLaboratoire d'Optique et Biosciences, École Polytechnique, CNRS, INSERM, Institut Polytechnique de Paris, 91120, Palaiseau, France.
Julien GrosLaboratoire d'Optique et Biosciences, École Polytechnique, CNRS, INSERM, Institut Polytechnique de Paris, 91120, Palaiseau, France.
K Swaminathan IyerSchool of Molecular Sciences, The University of Western Australia, Crawley, WA, 6009, Australia.
Jean-Louis MergnyLaboratoire d'Optique et Biosciences, École Polytechnique, CNRS, INSERM, Institut Polytechnique de Paris, 91120, Palaiseau, France. jean-louis.mergny@polytechnique.edu.
Nicole M SmithSchool of Molecular Sciences, The University of Western Australia, Crawley, WA, 6009, Australia. nicole.smith@uwa.edu.au.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRNA secondary structures, including G-quadruplexes (G4s), have emerged as vital players in protein-RNA interactions. The RNA-binding protein Fused in Sarcoma (FUS), which is strongly implicated in both neurodegenerative disease and cancer, is known to interact with RNA molecules through a variety of GU-rich sequences. However, a definitive consensus motif for FUS-RNA recognition and binding has not yet been determined. Here, we hypothesize that G4 structures, which are inherently G-rich, may play a key role in FUS binding.

resultsWe examine the role of G4s in FUS-RNA binding by developing an RNA immunoprecipitation sequencing (RIP-seq) protocol under G4-stabilizing and non-stabilizing conditions. We find that G4s regulate the binding of FUS to target RNAs, providing new information on protein-RNA binding motifs, while reinforcing the importance of RNA secondary structures as pivotal regulators of protein interactions.

conclusionsThese insights advance our understanding of FUS-RNA binding dynamics and future potential for identifying new therapeutic targets for neurodegenerative disease and other FUS-related pathologies.

Indexed as

G-QuadruplexesRNARNA-Binding Protein FUSTranscriptomeHumansProtein BindingFUS protein, humanRNARNA-Binding Protein FUSFUSFused in sarcomaG4 RIP-seqG-quadruplexRNA secondary structure

Identifiers

PMID41029441
PMCPMC12482648

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.