Evidence map›Paper›PMID 41028711›Full record

ArticleNature communications2025

Genetic tuning of retinal ganglion cell subtype identity to drive visual behavior.

Marcos L Aranda, Jacob D Bhoi, Omar A Payán Parra, Seul Ki Lee, Tomoko Yamada, Yue Yang, Tiffany M Schmidt

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Marcos L ArandaDepartment of Neurobiology, Northwestern University, Evanston, IL, USA.ORCID http://orcid.org/0000-0003-1891-3476
Jacob D BhoiDepartment of Neurobiology, Northwestern University, Evanston, IL, USA.
Omar A Payán ParraDepartment of Neurobiology, Northwestern University, Evanston, IL, USA.
Seul Ki LeeDepartment of Neurobiology, Northwestern University, Evanston, IL, USA.
Tomoko YamadaDepartment of Neurobiology, Northwestern University, Evanston, IL, USA.
Yue YangDepartment of Neurobiology, Northwestern University, Evanston, IL, USA.
Tiffany M SchmidtDepartment of Neurobiology, Northwestern University, Evanston, IL, USA. tiffany.schmidt@northwestern.edu.ORCID http://orcid.org/0000-0002-4791-6775

Funding

Genetic mapping of visual circuitsDP2EY027983 · NEI · NORTHWESTERN UNIVERSITY · PI SCHMIDT, TIFFANY M. · 2016 to 2019
$2.7M
Mechanisms of Genome Organization in Brain Development and BehaviorU01DA053691 · NIDA · NORTHWESTERN UNIVERSITY · PI YAMADA, TOMOKO · 2020 to 2024
$2.4M
Genetic Underpinnings of ipRGC DiversityR01EY034662 · NEI · NORTHWESTERN UNIVERSITY · PI Tiffany M. Schmidt, YUE YANG · 2023 to 2026
$2.2M
Mechanisms of Genome Architecture Regulation in Motor LearningR01NS123285 · NINDS · NORTHWESTERN UNIVERSITY · PI YANG, YUE · 2021 to 2025
$2.1M
Visual Sciences T32T32EY025202 · NEI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Gregory William Schwartz · 2015 to 2026
$1.4M
NEI NIH HHS DP2 EY027983NEI NIH HHS R01 EY034662NEI NIH HHS T32 EY025202NIDA NIH HHS U01 DA053691NINDS NIH HHS R01 NS123285U.S. Department of Health & Human Services | NIH | National Eye Institute (NEI) EY025202U.S. Department of Health & Human Services | NIH | National Eye Institute (NEI) EY027983U.S. Department of Health & Human Services | NIH | National Institute of Neurological Disorders and Stroke (NINDS) NS123285U.S. Department of Health & Human Services | NIH | National Institute on Drug Abuse (NIDA) DA053691
6 · The paper itself

Abstract

The distinct blend of molecular and cellular features that define neuronal subtype identity are central to shaping how individual subtypes impact animal behavior. The diversity of the mammalian nervous system is vast - the retina alone contains over 100 neuronal subtypes. Yet, the genetic processes giving rise to this stunning structural and functional diversity remain poorly understood. Here, we uncover a graded expression pattern of the transcription factor BRN3B that tunes and maintains multiple, subtype-defining transcriptional and morphophysiological features of the melanopsin-expressing, intrinsically photosensitive retinal ganglion cells (ipRGCs) in mice. Disruption of BRN3B expression levels causes the transcriptional and morphophysiological identity of ipRGC subtypes to begin to converge, leading to dysfunction in multiple ipRGC-dependent behaviors. These findings show that graded levels of a single transcription factor can tune a diverse array of features to shape neuronal identity and circuit function to drive behavior.

Indexed as

Behavior, AnimalRetinal Ganglion CellsTranscription Factor Brn-3BVision, OcularAnimalsFemaleMaleMelanopsinMiceMice, Inbred C57BLMice, KnockoutMice, TransgenicRetinaRod OpsinsMelanopsinRod OpsinsTranscription Factor Brn-3B

Identifiers

PMID41028711
PMCPMC12484735

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.