Evidence map›Paper›PMID 41028354›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2026

Opto-APCs: Displaying Phytochrome B on the Surface of Living Cells for Optogenetic Studies.

Anna K Ehret, Marissa Russ, O Sascha Yousefi, Wolfgang W Schamel

Abstract read
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In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Anna K EhretSignaling Research Centers BIOSS and CIBSS, Freiburg, Germany.
Marissa RussSignaling Research Centers BIOSS and CIBSS, Freiburg, Germany.
O Sascha YousefiSignaling Research Centers BIOSS and CIBSS, Freiburg, Germany.
Wolfgang W SchamelSignaling Research Centers BIOSS and CIBSS, Freiburg, Germany. wolfgang.schamel@biologie.uni-freiburg.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Interactions between proteins on the surface of two cells are pivotal in determining cell fate. These might be receptor-ligand pairs or adhesion molecules. Mechanistic and functional details of these interactions can be studied by optogenetics using parts of the photoreceptor phytochrome B (PhyB) of Arabidopsis thaliana. In these cases, PhyB serves as a membrane-bound ligand for engineered receptors or adhesion molecules. Here, we provide a protocol to generate cells that display PhyB as a membrane-bound protein on their surface to serve as the ligand. This is done by expressing a transmembrane SpyCatcher protein on the cells and covalently coupling purified recombinant PhyB-SpyTag to these cells. Coming from immunology, we call the PhyB-coupled cells opto-antigen-presenting cells (opto-APCs).

Indexed as

ArabidopsisArabidopsis ProteinsOptogeneticsPhytochrome BArabidopsis ProteinsPHYB protein, ArabidopsisPhytochrome BLigandOptogeneticsPhytochrome BReceptorSpyCatcherSpyTag

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.