Evidence map›Paper›PMID 41028343›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2026

FTIR Spectroscopy of Red and Far-Red-Light Sensing Phytochromes In vitro.

Moona Kurttila, Janne A Ihalainen

Abstract read
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In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Moona KurttilaNanoscience Centre, Department of Biological and Environmental Sciences, University of Jyväskylä, Jyväskylä, Finland.
Janne A IhalainenNanoscience Centre, Department of Biological and Environmental Sciences, University of Jyväskylä, Jyväskylä, Finland. janne.ihalainen@jyu.fi.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The action of phytochromes is controlled by a tetrapyrrole bilin chromophore that isomerizes upon red or far-red-light illumination. Photoactivation results in a multitude of structural rearrangements of the protein, including secondary structural changes and changes in the interaction patterns of the chromophore and the protein scaffold. The IR signals of phytochromes originate from molecular vibrations of both the chromophore and the protein. Being sensitive to molecular interactions, the vibrational frequencies reveal sub-angstrom-level information about structural changes of a phytochrome protein in solution. Phytochromes are relatively easy to produce and modify, they can be concentrated into high concentrations, and their photocycle is reversible, both thermally and by light. These qualities make phytochromes excellent molecules for FTIR spectroscopic studies. Furthermore, the effect of pH, temperature, or buffer conditions on photoactivation or intramolecular interactions can be studied by means of FTIR spectroscopy.

Indexed as

LightPhytochromeHydrogen-Ion ConcentrationSpectroscopy, Fourier Transform InfraredTemperaturePhytochromeAmide I vibrationCarbonyl vibrationMolecular interactionsMolecular vibrationsPhotoactive protein

Identifiers

PMID41028343

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.