Evidence map›Paper›PMID 41028153›Full record

ArticleScientific reports2025

Field outbreak investigation and immunoinformatic analysis suggest potential immune evasion by Newcastle disease virus Sub-Genotype XIV.2 in Nigeria.

Mohammed Usman Sajo, Saraya Mshelia Hyeladzira, Yasheruram Mohammed Shettima, Jallailudeen Rabana Lawal, Halima Idrisa Gambo, Juliana James Ndahi, Abdur Razzak, Otun Saha, Jean Nepomuscene Hakizimana, Augustino Chengula and 3 more

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Mohammed Usman SajoDepartment of Microbiology, Parasitology and Biotechnology, College of Veterinary Medicine and Biomedical Sciences, Sokoine University of Agriculture, Morogoro, 67152, Tanzania. sajom@unimaid.edu.ng.
Saraya Mshelia HyeladziraVeterinary Teaching Hospital, University of Maiduguri, Maiduguri, 600001, Nigeria.
Yasheruram Mohammed ShettimaAnimal Virus Research Laboratory, Department of Veterinary Microbiology, Faculty of Veterinary Medicine, University of Maiduguri, Maiduguri, 600001, Nigeria.
Jallailudeen Rabana LawalVeterinary Teaching Hospital, University of Maiduguri, Maiduguri, 600001, Nigeria.
Halima Idrisa GamboVeterinary Teaching Hospital, University of Maiduguri, Maiduguri, 600001, Nigeria.
Juliana James NdahiVeterinary Teaching Hospital, University of Maiduguri, Maiduguri, 600001, Nigeria.
Abdur RazzakDepartment of Microbiology, Noakhali Science and Technology University, Noakhali, 3814, Bangladesh.
Otun SahaDepartment of Microbiology, Noakhali Science and Technology University, Noakhali, 3814, Bangladesh.
Jean Nepomuscene HakizimanaOR Tambo Africa Research Chair for Viral Epidemics, SACIDS Foundation for One Health Sokoine University of Agriculture, Morogoro, 67152, Tanzania.
Augustino ChengulaDepartment of Microbiology, Parasitology and Biotechnology, College of Veterinary Medicine and Biomedical Sciences, Sokoine University of Agriculture, Morogoro, 67152, Tanzania.
Dong-Hun LeeCollege of Veterinary Medicine, Konkuk University Zoonotic Disease Research Center, Konkuk University, Seoul, 05029, Republic of Korea.
Abdul-Dahiru El-YugudaAnimal Virus Research Laboratory, Department of Veterinary Microbiology, Faculty of Veterinary Medicine, University of Maiduguri, Maiduguri, 600001, Nigeria.
Gerald MisinzoDepartment of Microbiology, Parasitology and Biotechnology, College of Veterinary Medicine and Biomedical Sciences, Sokoine University of Agriculture, Morogoro, 67152, Tanzania. gerald.misinzo@sacids.org.

Funding

Carnegie Corporation of New York DOCTAS Grant G-22-59858Partnership in Applied Sciences, Engineering and Technology, (PASET) under the Regional Scholarship and Innovation Fund (RSIF) P165581
6 · The paper itself

Abstract

Poultry production is one of the fastest-growing agricultural sub-sectors in Nigeria. However, it faces numerous challenges, mainly from frequent Newcastle disease (ND) outbreaks even in vaccinated flocks, causing huge economic losses. The recurring outbreaks raise concerns about the efficacy of ND vaccine and the need to understand the immunomodulatory mechanism of the ND virus (NDV). This study investigated a recent outbreak of NDV that resulted in 95% mortality in a vaccinated broiler parent stock in Nigeria by utilizing immunoinformatic tools to elucidate the possible immune evasion features of the disease-causing NDV. Genetic analysis of the complete fusion gene showed that the NDV isolate belong to sub-genotype XIV.2, a virulent strain prevalent in Nigeria. Predicted immunogenic peptides from the sub-genotype XIV.2 proteins revealed notable amino acid variations (R114Q, V118I, A220V) in both Major Histocompatibility Complex class I and II epitopes compared to common NDV vaccine and other prominent field strains. Modelling and structural validation of the BF2*2101 chicken allele showed 99% residues within the allowed regions in Ramachandran plot and - 6.61 Z-score, confirming its reliability. Immune simulation indicated that LaSota-Komorov prime-boost vaccine-simulation could not confer protection against sub-genotype XIV.2 virus simulated-challenge, despite eliciting humoral immune response. These results provide a valuable insight for developing ND vaccines that could effectively counter the immune cell interference of sub-genotype XIV.2, although further experimental validation is needed to characterize key biological interactions. A multifaceted approach encompassing improved biosecurity and the development of an effective sub-genotype XIV.2-matched vaccine is crucial to mitigate the persistent threat of ND in Nigeria.

Indexed as

Disease OutbreaksImmune EvasionNewcastle DiseaseNewcastle disease virusPoultry DiseasesAnimalsChickensComputational BiologyGenotypeNigeriaViral VaccinesViral VaccinesFood securityImmunoinformaticsNewcastle disease virusNigeriaPoultryVaccine

Identifiers

PMID41028153
PMCPMC12484761

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.