Evidence map›Paper›PMID 41028083›Full record

ArticleScientific reports2025

Computational repurposing of drugs against dengue virus targeting NS5 and methyltransferase proteins.

Murthaeti Yaswanth, Amit Dubey, Aisha Tufail, Subrata Nath, Saravanan Janardhan, Michele Maffia, Andrea Ragusa, Vipin Kumar Mishra

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Murthaeti Yaswanth *Department of Pharmaceutical Chemistry, PESU Institute of Pharmacy, PES University, Bangalore, 560100, Karnataka, India.
Amit Dubey *Center for Global Health Research, Saveetha Medical College and Hospital, Saveetha Institute of Medical and Technical Sciences, Chennai, 600077, Tamil Nadu, India.
Aisha Tufail *Computational Chemistry and Drug Discovery Division, Quanta Calculus, Greater Noida, 201310, Uttar Pradesh, India.
Subrata Nath *Chemistry Division, School of Advanced Science and Languages, VIT Bhopal University Bhopal, Bhopal, India.
Saravanan JanardhanDepartment of Pharmaceutical Chemistry, PESU Institute of Pharmacy, PES University, Bangalore, 560100, Karnataka, India.
Michele MaffiaDepartment of Experimental Medicine, University of Salento, Via Lecce- Monteroni, Lecce, 73100, Italy.
Andrea RagusaDepartment of Life Sciences, Health and Health Professions, Link Campus University, Via del Casale di San Pio V 44, Rome, 00165, Italy. a.ragusa@unilink.it.
Vipin Kumar MishraChemistry Division, School of Advanced Science and Languages, VIT Bhopal University Bhopal, Bhopal, India. vipinkumarmishra@vitbhopal.ac.in.

Funding

POS SALUTE PROGETTO T3-AN-18 SISAGEN-CARDIO (Sistema Integrato Sanitario per le malattie GEnetiche CARDIOvascolari), . CUP F83C22001400001
6 · The paper itself

Abstract

Dengue virus (DENV) remains a significant global health challenge, infecting approximately 400 million individuals annually. This study utilizes molecular docking and molecular dynamics (MD) simulations to investigate the binding dynamics and stability of Avermectin and Doramectin with DENV Methyltransferase (MTase) and NS5 proteins. Root Mean Squared Deviation (RMSD) analysis revealed stable complexes, with values ranging from 2.5 to 3.2 Å. The radius of gyration (Rg) values stabilized around 20-23 Å, indicating compact structural integrity. Binding free energy calculations demonstrated that Doramectin exhibited stronger predicted binding and may offer improved inhibitory potential, with ΔG values of -13.9 ± 2.8 kcal/mol for MTase and - 23.8 ± 0.82 kcal/mol for NS5, compared to Avermectin (-5.8 ± 1.2 kcal/mol and - 4.8 ± 0.52 kcal/mol, respectively). Dynamic Cross-Correlation Matrix (DCCM) analysis identified critical correlated motions in key binding residues, such as Gly79 and Arg78 in MTase and Gly104 and Arg155 in NS5, emphasizing Doramectin's role in stabilizing protein conformations. Key interactions through hydrogen bonding and residue mapping, involving Ser50, Gly52, and Asp141, played pivotal roles in inhibitor binding. This study highlights Doramectin as a promising candidate for further investigation in the treatment of Dengue.

Indexed as

Antiviral AgentsDengue VirusDrug RepositioningMethyltransferasesViral Nonstructural ProteinsDengueHumansIvermectinMolecular Docking SimulationMolecular Dynamics SimulationProtein BindingAntiviral AgentsavermectinIvermectinMethyltransferasesNS5 protein, dengue virusViral Nonstructural ProteinsAvermectinDoramectinMethyltransferaseMolecular DockingMolecular dynamics simulationNS5 protein

Identifiers

PMID41028083
PMCPMC12484854

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.