Evidence map›Paper›PMID 41028020›Full record

ArticleScientific reports2025

Automatic detection of harmful cyanobacterial genera using deep CNN models and artemisinin optimization.

Fatih Topaloglu, Soner Kiziloluk, Eser Sert, Muhammed Yildirim

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Fatih TopalogluDepartment of Computer Engineering, Malatya Turgut Ozal University, Malatya, Turkey.
Soner KizilolukDepartment of Computer Engineering, Malatya Turgut Ozal University, Malatya, Turkey.
Eser SertDepartment of Computer Engineering, Malatya Turgut Ozal University, Malatya, Turkey.
Muhammed YildirimDepartment of Computer Engineering, Malatya Turgut Ozal University, Malatya, Turkey. muhammed.yildirim@ozal.edu.tr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Concerns over the spread of Cyanobacteria, which can lead to dangerous blooms that harm drinking water quality and, therefore, the health of plants and animals, are being raised by global warming. Traditional methods for assessing the amount of toxic species in water samples are often time-consuming, require intensive manual effort, are prone to subjective errors, and can lead to delays in necessary water management interventions. This emphasizes the pressing need for a quick and precise automated method. Both aquatic and terrestrial environments include cyanobacteria, and under some circumstances, poisonous cyanobacteria can grow in large numbers and form harmful blooms called harmful cyanobacterial blooms (Cyano-HABs). In addition, cyanoHABs cause hypoxia, ecological imbalances, the generation of toxins, and other detrimental phenomena that put people, animals, and plants in danger of illness. Climate change is expected to cause these situations to increase in frequency and globally. This study presents a novel approach for the automatic detection of harmful cyanobacteria genera by utilizing a newly introduced and publicly available dataset, TCB-DS. In the initial stage, discriminative features are extracted using two powerful deep Convolutional Neural Network (CNN) models: ShuffleNet and ResNet-50. Subsequently, feature fusion is applied to the extracted features to enhance the representation. Then, to select the most relevant features, feature selection is performed using the Artemisinin Optimization (AO) algorithm, a robust meta-heuristic algorithm inspired by the mechanisms of malaria treatment and recently proposed in 2024. This step aims to reduce feature redundancy and improve the overall efficiency of the model. In classifying microscopic images of cyanobacteria species with the proposed method, GoogleNet, MobileNetV2, EfficientNetb0, DarkNet53, ShuffleNet, and ResNet101 models were used. Among these, the proposed method obtained the highest accuracy, with a mean accuracy of 97.471% and max accuracy of 97.683%. Since these results are the highest accuracy values obtained in the TCB-DS dataset, our proposed method significantly improves water quality monitoring in our world.

Indexed as

ArtemisininsCyanobacteriaHarmful Algal BloomNeural Networks, ComputerAlgorithmsDeep LearningEnvironmental MonitoringArtemisininsArtemisinin optimizationCyanobacterial generaResnet50ShuffleNetWater quality

Identifiers

PMID41028020
PMCPMC12484537

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.