Evidence map›Paper›PMID 41028018›Full record

ArticleScientific data2025

Chromosomal-level genome assembly of Drosophila suzukii Matsumura (Diptera: Drosophilidae).

Ruijuan Wang, Huanhuan Gao, Shan Zhao, Xiaoyan Dai, Zhenjuan Yin, Long Su, Chengxing Wang, Hao Chen, Li Zheng, Yan Liu and 1 more

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Ruijuan WangInstitute of Plant Protection, Shandong Academy of Agricultural Sciences, Jinan, 250100, China.
Huanhuan GaoInstitute of Plant Protection, Shandong Academy of Agricultural Sciences, Jinan, 250100, China.
Shan ZhaoInstitute of Plant Protection, Shandong Academy of Agricultural Sciences, Jinan, 250100, China.
Xiaoyan DaiInstitute of Plant Protection, Shandong Academy of Agricultural Sciences, Jinan, 250100, China.
Zhenjuan YinInstitute of Plant Protection, Shandong Academy of Agricultural Sciences, Jinan, 250100, China.
Long SuInstitute of Plant Protection, Shandong Academy of Agricultural Sciences, Jinan, 250100, China.ORCID 0009-0003-2226-6889
Chengxing WangInstitute of Plant Protection, Shandong Academy of Agricultural Sciences, Jinan, 250100, China.
Hao ChenInstitute of Plant Protection, Shandong Academy of Agricultural Sciences, Jinan, 250100, China.
Li ZhengInstitute of Plant Protection, Shandong Academy of Agricultural Sciences, Jinan, 250100, China.
Yan LiuInstitute of Plant Protection, Shandong Academy of Agricultural Sciences, Jinan, 250100, China. liuyan8882@126.com.
Yifan ZhaiInstitute of Plant Protection, Shandong Academy of Agricultural Sciences, Jinan, 250100, China. saaszyifan@163.com.

Funding

National Natural Science Foundation of China (National Science Foundation of China) 32202313
6 · The paper itself

Abstract

Drosophila suzukii, an invasive pest native to East Asia, has spread globally over the past two decades, posing severe threats to soft-skinned fruits due to its strong reproductive capabilities and high adaptation. However, the absence of high-quality genomic resources has hindered a comprehensive understanding of its ecological adaptations and invasion strategies. Here, we present a chromosome-level genome assembly of D. suzukii using PacBio HiFi, Illumina short, and Hi-C data. The assembled genome size totals 157.35 Mb with a scaffold N50 of 25.66 Mb by anchoring 86.59% (136.24 Mb) of the assembly to six chromosomes. BUSCO analysis indicates completeness, with a score of 98.1% (n = 1,367), comprising 97.4% single-copy BUSCOs and 0.7% duplicated BUSCOs. The genome contains 17.41% (27.39 Mb) repetitive elements and encodes 14,742 predicted protein-coding genes. Comparative genomic analyses reveal strong chromosomal synteny between D. suzukii and Drosophila melanogaster. This high-quality genome assembly is a critical resource for elucidating the evolutionary dynamics, ecological adaptations, and invasive biology of D. suzukii, providing valuable insights into pest control strategies.

Indexed as

Chromosomes, InsectDrosophilaGenome, InsectAnimalsSynteny

Identifiers

PMID41028018
PMCPMC12484873

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.