Evidence map›Paper›PMID 41027908›Full record

ArticleNature communications2025

A doubly stochastic renewal framework for partitioning spiking variability.

Cina Aghamohammadi, Chandramouli Chandrasekaran, Tatiana A Engel

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Continuous partitioning of neuronal variability.bioRxiv : the preprint server for biology · 2025
    Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Cina AghamohammadiPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.ORCID http://orcid.org/0000-0002-0028-0853
Chandramouli ChandrasekaranDepartment of Anatomy & Neurobiology, Boston University, Boston, MA, USA.ORCID http://orcid.org/0000-0002-1711-590X
Tatiana A EngelPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA. tatiana.engel@princeton.edu.ORCID http://orcid.org/0000-0001-5842-9406

Funding

Multimodal Characterization of Prefrontal and Premotor Circuits Underlying Perceptual Decision Making in Therhesus MonkeyR01NS122969 · NINDS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI CHANDRASEKARAN, CHANDRAMOULI, LUEBKE, JENNIFER I · 2021 to 2025
$3.1M
Linking Motor Cortex Activity and Movement in the Mouse Orofacial SystemR01NS121409 · NINDS · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI Michael Nicholas Economo · 2022 to 2026
$2.1M
Multiscale computational frameworks for integrating large-scale cortical dynamics, connectivity, and behaviorRF1DA055666 · NIDA · PRINCETON UNIVERSITY · PI ENGEL, TATIANA · 2021 to 2021
$1.3M
Discovering dynamic computations from large-scale neural activity recordingsR01EB026949 · NIBIB · COLD SPRING HARBOR LABORATORY · PI ENGEL, TATIANA · 2018 to 2020
$1.3M
Organization and Dynamics of Premotor and Prefrontal Cortical Circuits Mediating Goal-Directed BehaviorR00NS092972 · NINDS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI CHANDRASEKARAN, CHANDRAMOULI · 2018 to 2020
$747k
Graphical Processing Units and a Large-Memory Compute Node for Applications in Genomics, Neuroscience, and Structural BiologyS10OD028632 · OD · COLD SPRING HARBOR LABORATORY · PI SIEPEL, ADAM CHARLES · 2020 to 2020
$437k
Causal Roles of Dorsolateral Prefrontal and Dorsal Premotor Cortex in Perceptual Decision-MakingR21NS135361 · NINDS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI CHANDRASEKARAN, CHANDRAMOULI, RUSHMORE, RICHARD JARRETT · 2023 to 2023
$437k
Organization and Dynamics of Premotor and Prefrontal Cortical Circuits Mediating Goal-Directed BehaviorK99NS092972 · NINDS · STANFORD UNIVERSITY · PI CHANDRASEKARAN, CHANDRAMOULI · 2015 to 2016
$175k
Alfred P. Sloan Foundation Sloan Research FellowshipNIBIB NIH HHS R01 EB026949NIDA NIH HHS RF1 DA055666NIH HHS S10 OD028632NINDS NIH HHS K99 NS092972NINDS NIH HHS R00 NS092972NINDS NIH HHS R01 NS121409NINDS NIH HHS R01 NS122969NINDS NIH HHS R21 NS135361U.S. Department of Health & Human Services | National Institutes of Health (NIH) K99/R00 24 NS092972U.S. Department of Health & Human Services | National Institutes of Health (NIH) NS121409U.S. Department of Health & Human Services | National Institutes of Health (NIH) NS122969U.S. Department of Health & Human Services | National Institutes of Health (NIH) RF1DA055666U.S. Department of Health & Human Services | National Institutes of Health (NIH) S10OD028632- 01
6 · The paper itself

Abstract

The firing rate is a prevalent concept used to describe neural computations, but estimating dynamically changing firing rates from irregular spikes is challenging. An inhomogeneous Poisson process, the standard model for partitioning firing rate and spiking irregularity, cannot account for diverse spike statistics observed across neurons. We introduce a doubly stochastic renewal point process, a flexible mathematical framework for partitioning spiking variability, which captures the broad spectrum of spiking irregularity from periodic to super-Poisson. We validate our partitioning framework using intracellular voltage recordings and develop a method for estimating spiking irregularity from data. We find that the spiking irregularity of cortical neurons decreases from sensory to association areas and is nearly constant for each neuron under many conditions but can also change across task epochs. Spiking network models show that spiking irregularity depends on connectivity and can change with external input. These results help improve the precision of estimating firing rates on single trials and constrain mechanistic models of neural circuits.

Indexed as

Action PotentialsModels, NeurologicalAnimalsFemaleMacaca mulattaMaleMiceNerve NetNeuronsPoisson DistributionStochastic Processes

Identifiers

PMID41027908
PMCPMC12484930

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.