Evidence map›Paper›PMID 41026210›Full record

ArticleJournal of computer-aided molecular design2025

Molecular dynamics modeling and spectroscopic property prediction of V-type nerve agents for safe handling.

Koufou Antonios, Chalaris Michail

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of computer-aided molecular design, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Koufou AntoniosSchool of Chemistry, Faculty of Sciences, Democritus University of Thrace, Agios Loukas, Kavala, Greece.
Chalaris MichailSchool of Chemistry, Faculty of Sciences, Democritus University of Thrace, Agios Loukas, Kavala, Greece. mchalaris@chem.duth.gr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Detailed molecular potential models of three major representative substances of V type agents were created and tested against the scarce available experimental results. Molecular Dynamics simulations were conducted, and first main focus was elucidating thermodynamic and transport properties of these highly toxic organophosphorus compounds. Alongside, an in-depth investigation of their intermolecular structure and vibrational spectra calculations were performed. Using classical simulations key thermodynamic quantities such as density, enthalpy of vaporization, heat capacity under constant pressure as well as transport properties such as viscosity and self-diffusion coefficient were computed. Molecular level structural organization was probed through pair radial distribution functions, providing insight into short range interactions and ordering of molecular sites and atoms, as well as coordination numbers. Furthermore, infrared spectra concerning vibrational states were derived from inverse Fourier transform of the total dipole autocorrelation function, revealing signature vibrational modes in the infrared fingerprint region for functional group identification. This combined approach offers a critical molecular insight into the behavior of V type chemical warfare agents under ambient conditions, contributing to predictive modelling and safe handling of these hazardous substances. This study presents the first comprehensive atomistic simulation of VX, RVX, and CVX, offering detailed thermodynamic, transport, and spectroscopic insights through refined OPLS-based potential models.

Indexed as

Chemical Warfare AgentsMolecular Dynamics SimulationNerve AgentsOrganothiophosphorus CompoundsThermodynamicsChemical Warfare AgentsNerve AgentsOrganothiophosphorus CompoundsVX-agentCWAsIntermolecular structureIR spectrumMDMolecular dynamicsV agents

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.