Evidence map›Paper›PMID 41025428›Full record

ArticleAging cell2025

Aging Increases Short, Inverted Repeat-Mediated Genomic Instability In Vivo.

Pooja Mandke, Pallavi Kompella, Guliang Wang, Karen M Vasquez

Abstract read
In one paragraph

Article in Aging cell, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Pooja MandkeDell Pediatric Research Institute, Division of Pharmacology and Toxicology, College of Pharmacy, the University of Texas at Austin, Austin, Texas, USA.ORCID 0000-0001-5410-6968
Pallavi KompellaDell Pediatric Research Institute, Division of Pharmacology and Toxicology, College of Pharmacy, the University of Texas at Austin, Austin, Texas, USA.ORCID 0000-0002-9508-5603
Guliang WangDell Pediatric Research Institute, Division of Pharmacology and Toxicology, College of Pharmacy, the University of Texas at Austin, Austin, Texas, USA.ORCID 0000-0001-6871-7540
Karen M VasquezDell Pediatric Research Institute, Division of Pharmacology and Toxicology, College of Pharmacy, the University of Texas at Austin, Austin, Texas, USA.ORCID 0000-0002-6958-5073

Funding

REPAIR OF GENOME DESTABILIZING DNA STRUCTURESR01CA093729 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Karen M Vasquez · 2002 to 2026
$8.2M
Impact of Short Inverted Repeats on Genetic Instability at Mutation HotspotsR03CA187854 · NCI · UNIVERSITY OF TEXAS AT AUSTIN · PI VASQUEZ, KAREN M · 2014 to 2015
$155k
National Institutes of Health/National Cancer Institute CA093729 (R01)National Institutes of Health/National Cancer Institute CA187854 (R03)NCI NIH HHS R01 CA093729NCI NIH HHS R03 CA187854
6 · The paper itself

Abstract

Genomic instability is a hallmark of aging and cancer. A key contributor to genomic instability includes alternative DNA structures, such as cruciform-forming inverted repeats (IRs). Short IRs (< 100 bps) are abundant in the human genome, mutagenic, and enriched at mutation hotspots in human cancer genomes. Using an innovative mutation-reporter mouse model, we showed that short IRs are mutagenic in vivo. Further, we found that aging exacerbates IR-induced genomic instability, as evidenced by increased mutation frequencies and altered spectra in the spleen and brain of mice harboring either a short IR or control B-DNA sequence at 2 and 24 months of age. These findings establish a link between aging and enhanced mutagenesis at short IRs, providing a unique in vivo platform to investigate age-related mechanisms of DNA structure-mediated genomic instability.

Indexed as

AgingGenomic InstabilityInverted Repeat SequencesAnimalsHumansMiceMice, Inbred C57BLMutagenesisMutationagingcruciform DNADNA damagegenomic instabilityinverted repeatsmutagenesis

Identifiers

PMID41025428
PMCPMC12686595

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.