Evidence map›Paper›PMID 41024496›Full record

ArticleAngewandte Chemie (International ed. in English)2025

Hybrid of Indolizine and Merocyanine-A New Class of Organelle-Specific Dyes.

Jaqueline S A Badaro, Beata Koszarna, Maja Perkowska, Kristiana Kandere-Grzybowska, Diana V Kolygina, Olaf Morawski, Juhee Park, Bartosz Grzybowski, Irena Deperasińska, Daniel T Gryko

Abstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Hybrid of Indolizine and Merocyanine-A New Class of Organelle-Specific Dyes.Angewandte Chemie (International ed. in English) · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Jaqueline S A BadaroInstitute of Organic Chemistry of Polish Academy of Sciences, Kasprzaka 44/52, Warsaw, 01-224, Poland.ORCID 0000-0001-5475-7867
Beata KoszarnaInstitute of Organic Chemistry of Polish Academy of Sciences, Kasprzaka 44/52, Warsaw, 01-224, Poland.ORCID 0000-0003-4716-7169
Maja PerkowskaInstitute of Organic Chemistry of Polish Academy of Sciences, Kasprzaka 44/52, Warsaw, 01-224, Poland.
Kristiana Kandere-GrzybowskaCenter for Algorithmic and Robotized Synthesis, Institute for Basic Science (IBS), Ulsan, 44919, Republic of Korea.ORCID 0000-0003-4495-1820
Diana V KolyginaCenter for Algorithmic and Robotized Synthesis, Institute for Basic Science (IBS), Ulsan, 44919, Republic of Korea.ORCID 0000-0003-2664-6072
Olaf MorawskiInstitute of Physics, Polish Academy of Sciences, Al. Lotników 32/46, Warsaw, 02-668, Poland.ORCID 0000-0002-9475-668X
Juhee ParkCenter for Algorithmic and Robotized Synthesis, Institute for Basic Science (IBS), Ulsan, 44919, Republic of Korea.
Bartosz GrzybowskiInstitute of Organic Chemistry of Polish Academy of Sciences, Kasprzaka 44/52, Warsaw, 01-224, Poland.ORCID 0000-0001-6613-4261
Irena DeperasińskaInstitute of Physics, Polish Academy of Sciences, Al. Lotników 32/46, Warsaw, 02-668, Poland.ORCID 0000-0002-1680-9504
Daniel T GrykoInstitute of Organic Chemistry of Polish Academy of Sciences, Kasprzaka 44/52, Warsaw, 01-224, Poland.ORCID 0000-0002-2146-1282

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Unlocking the potential of electron-rich 2-hydroxyindolizines led to the discovery of a new class of dyes-indolizine-merocyanines (IndMer) and indolizine-cyanines. Tandem Friedel-Crafts alkylation followed by intramolecular nucleophilic aromatic substitution afforded structurally diverse dyes, as both the nucleophilic and electrophilic partners can be broadly modified. A convergent fragment coupling strategy allowed rapid access to these π-conjugated merocyanines in three steps from pyridines. Uniform distribution of the HOMO and LUMO combined with negligible change of dipole moment upon excitation is responsible for the intense orange or red emission of this new family of reasonably photostable dyes in a broad range of solvents. The new merocyanine dyes have the potential to target a variety of organelles-both uncharged and positively charged indolizine-merocyanines localize a subset of cellular lysosomes, positively charged indolizine-cyanine hybrid accumulates in mitochondria, while coumarin-merocyanine shows context-dependent localization to mitochondria and RNA-rich nucleoli of the living cells.

Indexed as

Fluorescent DyesIndolizinesOrganellesBenzopyransHumansIndolesMolecular StructureBenzopyransFluorescent DyesIndolesindolizineIndolizinesmerocyanineFluorescenceIndolizineMerocyaninesPolymethine dyesXanthene

Identifiers

PMID41024496
PMCPMC12624313

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.