Evidence map›Paper›PMID 41024317›Full record

ArticleEnvironmental microbiome2025

Sharp but consistent fungi species composition transition during a 40-yr urbanization in a subtropical city of China.

Yapeng Hao, Weimin Wang, Qun Guo, Wanyi Zhang, Liang Kou, Jiajia Zheng, Yu Bai, Ning Ma, Jing Yang, Xiangyun Xiong and 2 more

Abstract read
In one paragraph

Article in Environmental microbiome, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Yapeng Hao *Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, 100101, China.
Weimin Wang *Shenzhen Ecological and Environmental Monitoring Center of Guangdong Province, Shenzhen, 518049, China.
Qun GuoKey Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, 100101, China. guoq@igsnrr.ac.cn.
Wanyi ZhangKey Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, 100101, China.
Liang KouKey Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, 100101, China.
Jiajia ZhengKey Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, 100101, China.
Yu BaiKey Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, 100101, China.
Ning MaKey Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, 100101, China.
Jing YangKey Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, 100101, China.
Xiangyun XiongShenzhen Ecological and Environmental Monitoring Center of Guangdong Province, Shenzhen, 518049, China.
Hong LiangShenzhen Ecological and Environmental Monitoring Center of Guangdong Province, Shenzhen, 518049, China.
Shenggong LiKey Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, 100101, China. lisg@igsnrr.ac.cn.

Funding

Maintenance Project of State Environmental Protection Scientific Observation and Research Station in Shenzhen SZDL2023001063
6 · The paper itself

Abstract

backgroundRapid urbanization has profoundly impacted soil fungal dynamics and thus soil health, however, it remains poorly addressed due to lack of ideal experimental region. Taking Shenzhen of China, a megacity built within 30 years, as the study region, we analyzed the effects of rapid urbanization on soil fungal diversity, species composition, and community stability from the perspective of urbanization stages (within 10, 10-20, 20-30, 30-40, and over 40 years of urbanization), and original (forests, paddy fields, and drylands) and present (parks, streets, and residential areas) urban land-use types.

resultsResults showed that soil fungi of urban areas had significantly lower Chao1 and phylogenetic diversity (PD) than that of natural ecosystem (P < 0.05), i.e., forests in this study, with the lowest PD in street. The urbanization-induced higher phosphorus (P) content and thus lower soil N/P may explain the lower PD in city areas (P < 0.05). As the urbanization proceeded, soil fungal species composition shifted and resilience stability reduced significantly within 10 years (P < 0.05) compared with forests, but then the composition gradually transitioned to a consistent state while stability recovered to a certain extent for the rest of the urbanization stages. Key phyla driving these results included Ascomycota and Mortierellomycota. Original land-use types did not significantly affect urban soil fungal diversity or composition (P > 0.05). However, SparCC-based network analysis revealed no significant differences (P > 0.05) in fungal co-occurrence patterns or stability across different land-use types and urbanization stages, suggesting that urbanization may not strongly restructure fungal interaction networks.

conclusionsOur findings shed new lights on the scientific understanding and the urban spatial planning when considering soil health under the context of rapid urbanization. Additionally, they emphasize the need to incorporate multiple analytical approaches when studying microbial community interactions.

Indexed as

Land use cover changeSoil fungi community stabilitySoil fungi diversitySoil physicochemical propertiesUrbanizationUrban land-use categories

Identifiers

PMID41024317
PMCPMC12482580

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.