Evidence map›Paper›PMID 41023814›Full record

ArticleBMC genomics2025

Quantitative proteomic analysis of Arabidopsis thaliana with different levels of phospholipid:diacylglycerol acyltransferase1 expression.

Artur Piróg, Sylwia Klińska-Bąchor, Bartosz Głąb, Sara Kędzierska, Katarzyna Jasieniecka-Gazarkiewicz, Antoni Banaś, Sachin Kote

Abstract read
In one paragraph

Article in BMC genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Artur Piróg *International Centre for Cancer Vaccine Science, University of Gdansk, Kladki 24, Gdańsk, 80-822, Poland.
Sylwia Klińska-Bąchor *Intercollegiate Faculty of Biotechnology, University of Gdańsk and Medical University of Gdańsk, Abrahama 58, Gdańsk, 80-307, Poland. sylwia.klinska@ug.edu.pl.
Bartosz GłąbIntercollegiate Faculty of Biotechnology, University of Gdańsk and Medical University of Gdańsk, Abrahama 58, Gdańsk, 80-307, Poland.
Sara KędzierskaIntercollegiate Faculty of Biotechnology, University of Gdańsk and Medical University of Gdańsk, Abrahama 58, Gdańsk, 80-307, Poland.
Katarzyna Jasieniecka-GazarkiewiczIntercollegiate Faculty of Biotechnology, University of Gdańsk and Medical University of Gdańsk, Abrahama 58, Gdańsk, 80-307, Poland.
Antoni BanaśIntercollegiate Faculty of Biotechnology, University of Gdańsk and Medical University of Gdańsk, Abrahama 58, Gdańsk, 80-307, Poland.
Sachin KoteInternational Centre for Cancer Vaccine Science, University of Gdansk, Kladki 24, Gdańsk, 80-822, Poland. sachin.kote@ug.edu.pl.

Funding

European Funds for Smart Economy 2021-2027 (FENG), Priority FENG.02 Innovation-friendly environment, Measure FENG.02.01 International Research Agendas in the frame of the project "Science for Welfare, Innovations, and Forceful Therapies (SWIFT)" FENG.02.01-IP.05-0031/23Fundacja na rzecz Nauki Polskiej START2025International Research Agenda's Program of the Foundation for Polish Science MAB/2017/03Narodowe Centrum Nauki 2023/51/B/NZ3/00253Narodowe Centrum Nauki UMO-2017/25/B/NZ3/00721
6 · The paper itself

Abstract

backgroundPhospholipid:diacylglycerol acyltransferase1 (PDAT1) enzyme is known to play an important role in lipid metabolism. Initially, it was suggested that the construction of PDAT1 overexpressors may result in plant varieties with increased oil content. Contrary to those expectations, Arabidopsis thaliana lines overexpressing AtPDAT1 did not exhibit an increased accumulation of the triacylglycerol pool. However, the overexpressing lines exhibited accelerated growth rate, increased seed yield, and when subjected to cold treatments, they had greater thermotolerance, whereas knock-out line were more susceptible than the wild-type.

resultIn this work, we have performed a comparative proteomic analysis among wild-type, AtPDAT1-overexpressing and knock-out lines of Arabidopsis thaliana. For overexpressor lines we have observed significant changes in protein profiles related to processes that may partially explain increased plant vitality. Among others, we noticed elevated levels of subsequent groups of proteins: plastoglobule structural components and associated enzymes, proteins involved in photoprotection and in autophagy. The overexpressor lines were also characterized by upregulated level of proteins involved in abiotic stress responses, whereas the level of the proteins involved in biotic stress responses was downregulated. The opposite results were detected for the knock-out line.

conclusionThese results reveal a wide range of proteomic changes that reflect cellular alterations - some of which are supported by previous physiological and biochemical studies - induced by the genetic manipulation of a single gene encoding an enzyme directly involved in lipid metabolism. The results suggest a significant role of AtPDAT1 in plants responses to both biotic and abiotic stresses, highlighting its potential as a target for further research.

Indexed as

ArabidopsisArabidopsis ProteinsDiacylglycerol O-AcyltransferaseProteomeProteomicsAcyltransferasesGene Expression Regulation, PlantGene Knockout TechniquesPlants, Genetically ModifiedStress, PhysiologicalAcyltransferasesArabidopsis ProteinsDiacylglycerol O-AcyltransferasePDAT1 protein, ArabidopsisProteomeLipid metabolismPhospholipid:diacylglycerol acyltransferaseProteomicsStress response

Identifiers

PMID41023814
PMCPMC12482026

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.