Evidence map›Paper›PMID 41022913›Full record

ArticleScientific data2025

Chromosome-level Genome Assembly of the Tibetan Medicinal Plant Duyiwei (Phlomoides rotata).

Zhongqiong Tian, Junwei Wang, Zhefei Zeng, Jinfang Chen, Ticao Zhang, Qiong La

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Assembly of theGenes · 2026
    Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Zhongqiong TianKey Laboratory of Biodiversity and Environment on the Qinghai-Tibetan Plateau, Ministry of Education, School of Ecology and Environment, Tibet University, Lhasa, China.
Junwei WangKey Laboratory of Biodiversity and Environment on the Qinghai-Tibetan Plateau, Ministry of Education, School of Ecology and Environment, Tibet University, Lhasa, China.
Zhefei ZengKey Laboratory of Biodiversity and Environment on the Qinghai-Tibetan Plateau, Ministry of Education, School of Ecology and Environment, Tibet University, Lhasa, China.
Jinfang ChenKey Laboratory of Biodiversity and Environment on the Qinghai-Tibetan Plateau, Ministry of Education, School of Ecology and Environment, Tibet University, Lhasa, China.
Ticao ZhangState Key Laboratory of Phytochemistry and Natural Medicines, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China. zhangticao@mail.kib.ac.cn.ORCID 0000-0002-8578-6131
Qiong LaKey Laboratory of Biodiversity and Environment on the Qinghai-Tibetan Plateau, Ministry of Education, School of Ecology and Environment, Tibet University, Lhasa, China. lhagchong@163.com.

Funding

National Natural Science Foundation of China (National Science Foundation of China) 31760127
6 · The paper itself

Abstract

Phlomoides rotata (Duyiwei), a threatened Tibetan medicinal plant with anti-inflammatory and analgesic properties, has an understudied genome. We generated a chromosome-level assembly of its 4.12 Gb genome using Oxford Nanopore, PacBio HiFi, Illumina, and Hi-C sequencing, anchoring 22 pseudochromosomes (contig N50 = 173.16 Mb, scaffold N50 = 191.90 Mb). Annotation identified 70,881 protein-coding genes (99.3% complete via BUSCO). Comparative genomic analyses provide insights into the phylogenetic relationships of P. rotata. These data provide insights into high-altitude adaptation, bioactive compound biosynthesis, and evolutionary history, supporting conservation and drug development efforts.

Indexed as

Chromosomes, PlantGenome, PlantPlants, MedicinalPhylogenyTibet

Identifiers

PMID41022913
PMCPMC12480977

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.