Evidence map›Paper›PMID 41018493›Full record

ArticlePlant direct2025

Analysis of Genotypic Variations in the Anthocyanin Biosynthetic Pathway in Potatoes.

Chae-Min Lee, Seung Yong Shin, Su-Jin Park, Ji-Sun Park, Changsoo Kim, Hyun-Soon Kim, Hyo-Jun Lee

Abstract read
In one paragraph

Article in Plant direct, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Chae-Min LeePlant Systems Engineering Research Center Korea Research Institute of Bioscience and Biotechnology Daejeon South Korea.ORCID https://orcid.org/0009-0000-7604-0357
Seung Yong ShinPlant Systems Engineering Research Center Korea Research Institute of Bioscience and Biotechnology Daejeon South Korea.
Su-Jin ParkPlant Systems Engineering Research Center Korea Research Institute of Bioscience and Biotechnology Daejeon South Korea.
Ji-Sun ParkPlant Systems Engineering Research Center Korea Research Institute of Bioscience and Biotechnology Daejeon South Korea.
Changsoo KimDepartment of Crop Science Chungnam National University Daejeon South Korea.
Hyun-Soon KimPlant Systems Engineering Research Center Korea Research Institute of Bioscience and Biotechnology Daejeon South Korea.
Hyo-Jun LeePlant Systems Engineering Research Center Korea Research Institute of Bioscience and Biotechnology Daejeon South Korea.ORCID https://orcid.org/0000-0002-0690-7522

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Anthocyanins are pigments that contribute to plant defense and adaptation to environmental stresses. Given their antioxidant properties and positive impacts on human health, enhancing anthocyanin biosynthesis in plants holds significant economic importance. In potato, several genotypes produce a high amount of anthocyanins, but the molecular mechanisms underlying the genotypic variation of anthocyanin content remain poorly understood. Here, key genes that may determine the genotype-dependent capacity for anthocyanin biosynthesis were analyzed. Anthocyanin content in tubers from five genotypes was measured, and Heimeiren and Desiree, exhibiting high and low anthocyanin content, respectively, were selected. We were unable to identify any evidence of differing activity in anthocyanin biosynthesis enzymes based on single amino acid polymorphism analysis between the two genotypes. However, transcriptome sequencing coupled with prediction of gene function identified 27 candidate genes showing different expression levels in tubers of these genotypes. We additionally verified expression patterns of these genes and found that four genes encoding flavanone 3-hydroxylase, flavonoid 3',5'-hydroxylase, anthocyanin synthase (ANS), and anthocyanin O-methyltransferase (AOMT) were strong candidates for high accumulation of anthocyanins in Heimeiren. Particularly, ANS and AOMT are strong candidates increasing anthocyanin content in the tuber flesh. These results imply that genotype-dependent variations of anthocyanin biosynthesis may be due to difference of gene expression, but not enzymatic activities. Our study suggests key anthocyanin biosynthesis genes showing different expression levels in high- and low-anthocyanin genotypes, offering potential for the metabolic engineering of potatoes to increase anthocyanin content.

Indexed as

anthocyaninsgenotype dependencypotatotuber

Identifiers

PMID41018493
PMCPMC12465227

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.