Evidence map›Paper›PMID 41016828›Full record

ArticleJournal of microbiology and biotechnology2025

Development of a Multiplex TaqMan Real-Time RT-PCR Assay for the Rapid Differential Detection of Classic, MLB-Clade and VA-Clade Human Astroviruses.

Peipei Zheng, Jianhang Wang, Hongwei Yu, Qingping Luo, Huijie Gao, Zengjun Jin, Yilei Shi, Hanzhong Wang, Penghui Li, Feng Tian

Abstract read
In one paragraph

Article in Journal of microbiology and biotechnology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Peipei ZhengSchool of Medicine, Hebei University of Engineering, Handan 056038, P.R. China.
Jianhang WangSchool of Medicine, Hebei University of Engineering, Handan 056038, P.R. China.
Hongwei YuSchool of Medicine, Hebei University of Engineering, Handan 056038, P.R. China.
Qingping LuoKey Laboratory of Prevention and Control Agents for Animal Bacteriosis (Ministry of Agriculture and Rural Affairs), Institute of Animal Husbandry and Veterinary, Hubei Academy of Agricultural Sciences, Special One, Nanhuyaoyuan, Hongshan District, Wuhan 430064, P.R. China.
Huijie GaoThe Affiliated Hospital, Hebei Engineering University, Handan 056029, P.R. China.
Zengjun JinSchool of Medicine, Hebei University of Engineering, Handan 056038, P.R. China.
Yilei ShiSchool of Medicine, Hebei University of Engineering, Handan 056038, P.R. China.
Hanzhong WangCAS Key Laboratory of Special Pathogens and Biosafety, Wuhan Institute of Virology, Center for Biosafety Mega- Science, Chinese Academy of Sciences, Wuhan 430071, P.R. China.
Penghui LiSchool of Medicine, Hebei University of Engineering, Handan 056038, P.R. China.
Feng TianSchool of Medicine, Hebei University of Engineering, Handan 056038, P.R. China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The classical human astrovirus (HAstV) causes acute or severe gastroenteritis mainly among children and the elderly populations. The novel divergent HAstV-VA and HAstV-MLB clades related to encephalitis in immunocompromised patients, are genetically more similar to certain animal astroviruses, and have the potential for cross-species transmission. To identify all the three HAstV clades in a single reaction, we developed a quantitative reverse transcription PCR (RT-qPCR) method. Primers and probes were designed based on the conserved regions of the HAstV genomes that exhibited inter-clade divergence. This method was highly sensitive, as the detection limits were 95, 12.5 and 25 copies/μl for the classical HAstV, HAstV-MLB and HAstV-VA strains, respectively. Intra- and inter-assay variability revealed excellent reproducibility. Furthermore, this multiplex assay showed no cross-reactivity with other human pathogens. A total of 326 anal swabs from outpatients with AGE were examined: 5.83% were positive for the classical HAstV, 1.53% for the HAstV-MLB, and 0.31% for the HAstV-VA, while 0.31% for co-infections of HAstV-MLB/HAstV-VA. Conclusively, the developed multiplex RT-qPCR assay represents a tool with potential for laboratory and clinical diagnoses, epidemiological surveillance, prevention and control of the HAstV infection.

Indexed as

Astroviridae InfectionsMamastrovirusMultiplex Polymerase Chain ReactionReal-Time Polymerase Chain ReactionReverse Transcriptase Polymerase Chain ReactionAnal CanalChildChild, PreschoolDNA PrimersGastroenteritisHumansInfantMalePhylogenyReproducibility of ResultsRNA, ViralDNA PrimersRNA, ViralcladeHuman astrovirusmultiplex TaqMan real-time RT-PCRnucleic acid detection

Identifiers

PMID41016828
PMCPMC12535854

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.