Evidence map›Paper›PMID 41016473›Full record

ArticleVirologica Sinica2025

The pathogenic role and genomic characteristics of Epstein-Barr virus in vitreoretinal lymphoma.

Xiaoqing Liu, Guangjie Jiang, Chianru Tan, Kun Chen, Zhewei Sun, Jiaying Du, Bei Wang, Fuqi Ai, Yimin Ma, Yueru Tian and 2 more

Abstract read
In one paragraph

Article in Virologica Sinica, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Xiaoqing LiuDepartment of Laboratory Medicine, Huashan Hospital, Fudan University, Shanghai 200040, China.
Guangjie JiangDepartment of Laboratory Medicine, Huashan Hospital, Fudan University, Shanghai 200040, China.
Chianru TanSchool of Biomedical Engineering, Tsinghua University, Beijing 100084, China.
Kun ChenDepartment of Laboratory Medicine, Huashan Hospital, Fudan University, Shanghai 200040, China.
Zhewei SunDepartment of Laboratory Medicine, Huashan Hospital, Fudan University, Shanghai 200040, China.
Jiaying DuDepartment of Laboratory Medicine, Huashan Hospital, Fudan University, Shanghai 200040, China.
Bei WangDepartment of Laboratory Medicine, Huashan Hospital, Fudan University, Shanghai 200040, China.
Fuqi AiDepartment of Laboratory Medicine, Huashan Hospital, Fudan University, Shanghai 200040, China.
Yimin MaDepartment of Laboratory Medicine, Huashan Hospital, Fudan University, Shanghai 200040, China.
Yueru TianDepartment of Laboratory Medicine, Huashan Hospital, Fudan University, Shanghai 200040, China. Electronic address: vicky8025@126.com.
Yong GuoSchool of Biomedical Engineering, Tsinghua University, Beijing 100084, China. Electronic address: yongguo@tsinghua.edu.cn.
Ming GuanDepartment of Laboratory Medicine, Huashan Hospital, Fudan University, Shanghai 200040, China. Electronic address: guanming@shmu.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Epstein-Barr virus (EBV) infection is well-known for its association with lymphoproliferative disorders and various lymphomas, causing significant global morbidity and mortality. EBV-positive vitreoretinal lymphoma (VRL) is exceedingly rare. As a result, the pathogenic role and genomic characteristics of EBV in VRL remain poorly understood. In this study, we employed droplet digital PCR (ddPCR) combined with EBV-specific immunofluorescence assay to detect EBV in the vitreous fluid of fifty-three VRL patients. We found that approximately 28% (15/53) of the patients were EBV positive. Analysis of clinical data showed that EBV-positive VRL patients had shorter progression-free survival (PFS) compared to EBV-negative patients (P = 0.004). Additionally, through integration of EBV-targeted sequencing and PCR-based deep sequencing, we found that all five VRL-derived EBV genomes formed a distinct cluster within one phylogenetic branch. Meanwhile, several non-synonymous mutations were exclusively detected in the VRL group, including S229T in latent membrane protein 1 (LMP1) and G2248R in the Epstein-Barr virus BamHI-PraL fragment 1 (BPLF1). In conclusion, our findings suggest that EBV as a risk factor associated with poor prognosis in VRL, and we provide a genome-wide view of EBV sequence variations from VRL patients. This may offer insights into the pathogenic role of EBV in VRL and could potentially assist in the diagnosis and treatment of this disease.

Indexed as

Epstein-Barr Virus InfectionsGenome, ViralHerpesvirus 4, HumanLymphomaRetinal NeoplasmsVitreous BodyAdultAgedAged, 80 and overFemaleHumansMaleMiddle AgedPhylogenyEpstein-Barr virus (EBV)Genomic variantsVitreoretinal lymphoma (VRL)

Identifiers

PMID41016473
PMCPMC12665412

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.