Evidence map›Paper›PMID 41014900›Full record

ArticleBioorganic & medicinal chemistry2025

Discovery of inhibitors of the cancer-promoting phosphatase PRL-3 and their evaluation in intestinal organoids.

Andreas Hoffmann, Judith Weyershaeuser, Yamini Chand, Raphael Geißen, Nico Höfflin, Birgit Hoeger, Maja Köhn

Abstract read
In one paragraph

Article in Bioorganic & medicinal chemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Andreas HoffmannFaculty of Biology, University of Freiburg, 79104 Freiburg, Germany; Signalling Research Centres BIOSS and CIBSS, University of Freiburg, 79104 Freiburg, Germany.
Judith WeyershaeuserFaculty of Biology, University of Freiburg, 79104 Freiburg, Germany; Signalling Research Centres BIOSS and CIBSS, University of Freiburg, 79104 Freiburg, Germany.
Yamini ChandFaculty of Biology, University of Freiburg, 79104 Freiburg, Germany; Signalling Research Centres BIOSS and CIBSS, University of Freiburg, 79104 Freiburg, Germany; Institute for Cell Biology, University of Bonn, 53115 Bonn, Germany.
Raphael GeißenFaculty of Biology, University of Freiburg, 79104 Freiburg, Germany; Chemical Biology Program, Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center, New York, NY 10065, United States.
Nico HöfflinFaculty of Biology, University of Freiburg, 79104 Freiburg, Germany; Signalling Research Centres BIOSS and CIBSS, University of Freiburg, 79104 Freiburg, Germany.
Birgit HoegerGenome Biology Unit, EMBL Heidelberg, 69117 Heidelberg, Germany.
Maja KöhnFaculty of Biology, University of Freiburg, 79104 Freiburg, Germany; Signalling Research Centres BIOSS and CIBSS, University of Freiburg, 79104 Freiburg, Germany; Institute for Cell Biology, University of Bonn, 53115 Bonn, Germany; Genome Biology Unit, EMBL Heidelberg, 69117 Heidelberg, Germany. Electronic address: mkoehn@uni-bonn.de.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

Upregulation of the phosphatase of regenerating liver (PRL)-3 is associated with colorectal cancer as well as metastasis development and progression. PRL-3's overexpression impairs intestinal self-renewal capacity through causing intestinal stem cell death, correlating this cellular mechanism of tumor onset with PRL-3-mediated higher susceptibility to tumor formation upon inflammatory or mutational events. Therefore, PRL-3 inhibitors hold promise as potential therapeutic agents for cancer treatment. Based on the structure of the PRL inhibitor Analog 3, we evaluated here two sets of focused small molecule libraries and screened them in order to identify more potent and selective PRL-3 inhibitors. The best hit, named PRLthiophenib, showed higher inhibition potency in vitro than Analog 3 with improved selectivity for PRL-3 over other protein tyrosine phosphatases (PTPs), but not within the PRL family, which continues to be a challenge. PRLthiophenib presented high cellular stability and no long-term cytotoxicity. Furthermore, it rescued the growth capacity of an inducible PRL-3-expressing three-dimensional intestinal cell culture organoid system derived from a PRL-3 overexpressing mouse line, mimicking the rescue of intestinal self-renewal capacity. The results introduce PRLthiophenib as a complementary inhibitor to published ones and support drug discovery efforts toward therapeutic targeting of this challenging cancer-promoting phosphatase.

Indexed as

Antineoplastic AgentsDrug DiscoveryEnzyme InhibitorsIntestinesNeoplasm ProteinsOrganoidsProtein Tyrosine PhosphatasesAnimalsCell ProliferationDose-Response Relationship, DrugHumansMiceMolecular StructureSmall Molecule LibrariesStructure-Activity RelationshipAntineoplastic AgentsEnzyme InhibitorsNeoplasm ProteinsProtein Tyrosine PhosphatasesPTP4A3 protein, humanSmall Molecule LibrariesCancerCompound stabilityMolecular dockingOrganoidsPhosphatasePRL-3Small molecule inhibitors

Identifiers

PMID41014900
PMCPMC13433869

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.