Evidence map›Paper›PMID 41013679›Full record

ArticleEnvironmental microbiome2025

Identifying the drivers of microbial community changes and interactions in polluted coastal sediments.

Ana Ramljak, Stephanie Jurburg, Antonis Chatzinotas, Mavro Lučić, Marta Žižek, Ivana Babić, Nikolina Udiković-Kolić, Ines Petrić

Abstract read
In one paragraph

Article in Environmental microbiome, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ana RamljakDivision for Marine and Environmental Research, Ruder Bošković Institute, Zagreb, Croatia.
Stephanie JurburgDepartment of Applied Microbial Ecology, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany.
Antonis ChatzinotasDepartment of Applied Microbial Ecology, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany.
Mavro LučićDivision for Marine and Environmental Research, Ruder Bošković Institute, Zagreb, Croatia.
Marta ŽižekDivision for Marine and Environmental Research, Ruder Bošković Institute, Zagreb, Croatia.
Ivana BabićDivision for Marine and Environmental Research, Ruder Bošković Institute, Zagreb, Croatia.
Nikolina Udiković-KolićDivision for Marine and Environmental Research, Ruder Bošković Institute, Zagreb, Croatia.
Ines PetrićDivision for Marine and Environmental Research, Ruder Bošković Institute, Zagreb, Croatia. ipetric@irb.hr.

Funding

Hrvatska Zaklada za Znanost IP-2020-02-6510
6 · The paper itself

Abstract

Despite over three decades of research into the composition and distribution of microbial communities, gaps remain in our mechanistic understanding of microbial community assembly processes, especially in benthic communities in coastal zones continuously exposed to anthropogenic pressures. We analyzed the microbial communities (prokaryotes, fungi, and protists) in sediment samples from ports and bays located along the Adriatic coast chronically exposed to chemical and nutrient pollution, and explored how selective pressures (pollutants, nutrients, and environmental conditions) and dispersal shape these communities. We found that biogeographic factors (i.e. location) play a key role in structuring microbial communities, with benthic fungi also being shaped by the presence of pollutants and nutrients. Strong correlations between nutrient loads and pollutants were observed, along with weakened interactions between microbial communities, particularly between prokaryotes and protists, in the presence of specific pollutants (bismuth, cadmium, copper, zinc, mercury). These results are an important step in disentangling the complex interactions between pollutants and microbial community dynamics in aquatic ecosystems. Further research is needed to assess how these shifts in microbial community dynamics may affect ecosystem services in vulnerable coastal zones.

Indexed as

Adriatic SeaAnthropogenic pressuresCoastal ecosystemsMicrobial biogeographyMicrobial interactionsSediment pollution

Identifiers

PMID41013679
PMCPMC12465815

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.