Evidence map›Paper›PMID 41013198›Full record

ArticleBMC genomics2025

Streptococcus anginosus of the urogenital tract: evidence of the same strain across anatomical sites of the same females.

Helen Appleberry, Jennifer Garcia-Israel, Leah Boger, Swarnali Banerjee, Alan J Wolfe, Catherine Putonti

Abstract read
In one paragraph

Article in BMC genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Strain-level genomic analysis ofMicrobiology spectrum · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Helen AppleberryDepartment of Biology, Loyola University Chicago, Chicago, IL, USA.
Jennifer Garcia-IsraelDepartment of Biological Science, Mount Holyoke College, South Hadley, MA, USA.
Leah BogerData Science Program, Loyola University Chicago, Chicago, IL, USA.
Swarnali BanerjeeData Science Program, Loyola University Chicago, Chicago, IL, USA.
Alan J WolfeDepartment of Microbiology and Immunology, Loyola University Chicago, Maywood, IL, USA.
Catherine PutontiDepartment of Biology, Loyola University Chicago, Chicago, IL, USA. cputonti@luc.edu.

Funding

Undergraduate Research Experience in Transdisciplinary Benign Urologic Disease.R25DK122954 · NIDDK · LOYOLA UNIVERSITY CHICAGO · PI Catherine Elizabeth Putonti · 2020 to 2026
$648k
Loyola University Chicago Mulcahy FellowshipNIDDK NIH HHS R25 DK122954NIH HHS R25DK122954
6 · The paper itself

Abstract

backgroundStreptococcus anginosus has been found to colonize multiple anatomical sites of the human body, including the oral cavity, gastrointestinal tract, skin, vagina, blood, and urinary tract. It is frequently isolated from catheterized urine samples obtained from adult females most often with lower urinary tract symptoms, but also on occasion from those without symptoms. Our prior genome analysis of 166 S. anginosus genomes identified two distinct groups, one - which we here call group Urinae - exhibits a tropism for the urinary tract.

resultsHere we sequenced 100 isolates collected from different urogenital sites, including isolates from urine (both catheterized and voided) samples, urethral swabs, perineal swabs, vaginal swabs, and a foreskin swab. These sequenced isolates, as well as 15 isolates previously sequenced by our group, were collected from 50 unique individuals, with isolates from multiple anatomic sites for 26 of these individuals. The majority (89.57%) of the isolates were representatives of the Urinae group and were found in all sample types. Expanding our prior statistical method, we determined that, for 11 females, the same strain of Urinae was isolated from more than one of the urogenital sites.

conclusionsThe identification of S. anginosus group Urinae strains from all urogenital sites sampled signifies that the tropism of this group is not restricted to the urinary tract. Rather, it seems to be a common constituent of the urogenital tract. The identification of the same strain shared across urogenital sample sites from the same individual suggests that the female urogenital sites in fact have interconnected microbiota.

Indexed as

Streptococcus anginosusUrogenital SystemAdultFemaleGenome, BacterialHumansPhylogenyStreptococcus anginosusUrinary microbiotaUrogenital microbiota

Identifiers

PMID41013198
PMCPMC12465951

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.