A Novel Cogu-like Virus Identified in Wine Grapes.

Jennifer Dahan, Gardenia E Orellana, Edison Reyes-Proaño, Jungmin Lee, Alexander V Karasev

Abstract read

In one paragraph

Article in Viruses, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it

0cells of the map it votes in

0citing papers in PubMed

–field-weighted citation impact

1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jennifer DahanDepartment of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, ID 83844-2329, USA.

Gardenia E OrellanaDepartment of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, ID 83844-2329, USA.

Edison Reyes-ProañoDepartment of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, ID 83844-2329, USA.ORCID 0000-0002-4593-5657

Jungmin LeeIndependent Researcher, Corvallis, OR 97330, USA.ORCID 0000-0002-8660-9444

Alexander V KarasevDepartment of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, ID 83844-2329, USA.ORCID 0000-0001-8197-0639

Funding

Genomics Resources Core (GRC)P30GM103324 · NIGMS · UNIVERSITY OF IDAHO · PI SETTLES, MATTHEW · 2013 to 2017

$5.0M

Idaho State Department of Agriculture SCBGPNIGMS NIH HHS P30 GM103324NIH COBRE P30GM103324United States Department of Agriculture 2072-21000-057-00DUnited States Department of Agriculture 2072-21220-003-00DUnited States Department of Agriculture 2072-30500-001-000DUnited States Department of Agriculture 5358-21220-002-18GUSDA-NIFA Hatch project IDA01560USDA-NIFA Hatch project IDA01712

6 · The paper itself

Abstract

A new negative-strand RNA virus was identified in grapevines from a 38-year-old 'Chardonnay' block in Idaho through high-throughput sequencing (HTS) of total RNA. This virus was tentatively named grapevine-associated cogu-like Idaho virus (GaCLIdV). GaCLIdV has three negative-sense, single-stranded RNA genome segments of ca. 7 kb, 1.9 kb, and 1.3 kb, encoding L protein (RNA-dependent RNA polymerase, RdRP), a movement protein (MP), and a nucleocapsid protein (NC), respectively, identified based on pair-wise comparisons with other cogu- and cogu-like viruses. In phylogenetic analysis based on the RdRP, GaCLIdV grouped within the family

Indexed as

Negative-Sense RNA VirusesPlant DiseasesVitisGenome, ViralHigh-Throughput Nucleotide SequencingIdahoPhylogenyRNA, ViralViral ProteinsWineRNA, ViralViral ProteinsChardonnaygrapevine-associated cogu-like Idaho virusvirus evolution

Identifiers

PMID41012603

DOI10.3390/v17091175

PMCPMC12474454

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.