Evidence map›Paper›PMID 41011756›Full record

ArticlePathogens (Basel, Switzerland)2025

AI-Enhanced FT-IR Spectroscopy: Evaluation of a Novel Tool for High-Throughput Serovar Typing of

Maja Dopuđ, Sandra Šuto, Dora Tomašković, Lucija Hlebić, Lovran Peinović, Silvio Špičić, Maja Zdelar Tuk, Irena Reil, Andrea Humski, Gordan Kompes and 5 more

Abstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Characterization ofPathogens (Basel, Switzerland) · 2026
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Maja DopuđLaboratory for Bacterial Zoonoses and Molecular Diagnostics of Bacterial Diseases, Department for Bacteriology and Parasitology, Croatian Veterinary Institute, 10000 Zagreb, Croatia.ORCID 0009-0009-0495-9861
Sandra ŠutoDepartment for Respiratory System Infections, and Skin and Soft Tissue Infections, Clinical Microbiology Service, Andrija Štampar Teaching Institute of Public Health, Clinical Microbiology Service, 10000 Zagreb, Croatia.ORCID 0000-0002-7561-3034
Dora TomaškovićLaboratory for Food Microbiology, Department for Veterinary Public Health, Croatian Veterinary Institute, 10000 Zagreb, Croatia.ORCID 0000-0002-2009-5997
Lucija HlebićLaboratory for Food Microbiology, Department for Veterinary Public Health, Croatian Veterinary Institute, 10000 Zagreb, Croatia.ORCID 0009-0003-9496-4192
Lovran PeinovićLaboratory for Food Microbiology, Department for Veterinary Public Health, Croatian Veterinary Institute, 10000 Zagreb, Croatia.ORCID 0009-0005-9845-491X
Silvio ŠpičićLaboratory for Bacterial Zoonoses and Molecular Diagnostics of Bacterial Diseases, Department for Bacteriology and Parasitology, Croatian Veterinary Institute, 10000 Zagreb, Croatia.ORCID 0000-0001-8317-5831
Maja Zdelar TukLaboratory for Bacterial Zoonoses and Molecular Diagnostics of Bacterial Diseases, Department for Bacteriology and Parasitology, Croatian Veterinary Institute, 10000 Zagreb, Croatia.
Irena ReilLaboratory for Bacterial Zoonoses and Molecular Diagnostics of Bacterial Diseases, Department for Bacteriology and Parasitology, Croatian Veterinary Institute, 10000 Zagreb, Croatia.ORCID 0000-0002-2198-557X
Andrea HumskiLaboratory for Food Microbiology, Department for Veterinary Public Health, Croatian Veterinary Institute, 10000 Zagreb, Croatia.ORCID 0000-0003-3027-1306
Gordan KompesLaboratory for General Bacteriology and Mycology, Department for Bacteriology and Parasitology, Croatian Veterinary Institute, 10000 Zagreb, Croatia.ORCID 0009-0000-4934-1357
Silvija Šoprek StrugarUniversity Hospital for Infectious Diseases Dr. Fran Mihaljević, 10000 Zagreb, Croatia.ORCID 0000-0002-5413-8393
Bojan PapićInstitute for Microbiology and Parasitology, Veterinary Faculty, University of Ljubljana, 1000 Ljubljana, Slovenia.ORCID 0000-0003-2484-9458
Jana AvberšekInstitute for Microbiology and Parasitology, Veterinary Faculty, University of Ljubljana, 1000 Ljubljana, Slovenia.ORCID 0000-0003-2107-7763
Andrzej MikolajczakMicrobiology & Infection Diagnostics Division, Eastern Europe, Bruker Daltonics GmbH & Co. KG, 28359 Bremen, Germany.
Sanja DuvnjakLaboratory for Bacterial Zoonoses and Molecular Diagnostics of Bacterial Diseases, Department for Bacteriology and Parasitology, Croatian Veterinary Institute, 10000 Zagreb, Croatia.ORCID 0000-0002-1308-267X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rapid and accurate serotyping of MATERIALS AND

methodsA total of 143 isolates representing different

resultsThe IR Biotyper demonstrated high reproducibility and complete concordance with standard serotyping methods, enabling accurate differentiation of the most prevalent

conclusionsOur findings demonstrate the applicability of FT-IR in routine laboratory work, with the potential to reduce typing time, reduce the number of strains, and lower overall costs required for epidemiological surveillance within the One Health approach.

Indexed as

Artificial IntelligenceSalmonella entericaSalmonella InfectionsSerotypingCroatiaHumansReproducibility of ResultsSalmonellaSerogroupSpectroscopy, Fourier Transform InfraredAIFT-IR spectroscopyIR Biotyperone healthSalmonella enterica

Identifiers

PMID41011756
PMCPMC12473089

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.