Evidence map›Paper›PMID 41001558›Full record

ArticleResearch square2025

Bridging Quantum Mechanics and Biology at the Million-Atom Scale.

Luc Wieners, Martin E Garcia

Abstract readPreprint
In one paragraph

Article in Research square, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors.

Luc WienersInstitute of Physics, University of Kassel, Heinrich-Plett-Straße 40, 34132 Kassel, Germany.
Martin E GarciaInstitute of Physics, University of Kassel, Heinrich-Plett-Straße 40, 34132 Kassel, Germany.ORCID 0000-0003-2418-1902

Funding

ChimeraX -- Next Generation Visualization and Analysis Software for Multiscale ModelingR01GM129325 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2018 to 2025
$5.2M
NIGMS NIH HHS R01 GM129325
6 · The paper itself

Abstract

The behaviour of proteins and other biomolecules is mainly governed by the quantum-mechanical character of their electrons. Accurately capturing the resulting interactions is essential for predicting molecular properties, obtaining spectroscopic data, and advancing drug design. However, the extreme computational cost of quantum calculations has historically limited their application to small systems of just a few hundred atoms. Here, we present a quantum-mechanical method that enables electronic structure calculations on biological systems at unprecedented scales, up to millions of atoms, while drastically reducing computational costs. We apply this approach to entire proteins and large biomolecular assemblies, including a complete bacteriophage

Identifiers

PMID41001558
PMCPMC12458572

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.