Evidence map›Paper›PMID 41000911›Full record

ArticlebioRxiv : the preprint server for biology2025

Understanding proneural-mesenchymal transition using patient-derived glioma stem-like cell (GSC) organoids and engineered extracellular matrix.

Autumn McManis, Charles Ashley Jimenez, Abha Shirolkar, Syed Raza Ur Rehman, Sumana Mallick, Malea Murphy, Akhilesh K Gaharwar, Irtisha Singh

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Autumn McManisInterdisciplinary Graduate Program in Genetics and Genomics, Texas A&M University, College Station, Texas 77843.ORCID 0000-0002-7415-3849
Charles Ashley JimenezDepartment of Cell Biology and Genetics, Texas A&M Health Science Center, Bryan, Texas 77807.
Abha ShirolkarDepartment of Cell Biology and Genetics, Texas A&M Health Science Center, Bryan, Texas 77807.
Syed Raza Ur RehmanDepartment of Biomedical Engineering, Texas A&M University, College Station, Texas 77843.
Sumana MallickDepartment of Cell Biology and Genetics, Texas A&M Health Science Center, Bryan, Texas 77807.
Malea MurphyDepartment Medical Physiology, Texas A&M Health Science Center, Bryan, TX 77807.
Akhilesh K GaharwarInterdisciplinary Graduate Program in Genetics and Genomics, Texas A&M University, College Station, Texas 77843.
Irtisha SinghInterdisciplinary Graduate Program in Genetics and Genomics, Texas A&M University, College Station, Texas 77843.

Funding

Osteoinductive Nanosilicate-Based Biomaterials for In Situ Craniomaxillofacial Bone RegenerationR01DE032031 · NIDCR · TEXAS ENGINEERING EXPERIMENT STATION · PI CARL A. GREGORY, Akhilesh K. Gaharwar · 2024 to 2026
$1.7M
Investigating the role Ikaros variants in multiple myeloma pathophysiology and drug sensitivityR01CA282251 · NCI · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI Irtisha Singh · 2024 to 2026
$1.1M
Investigating Pathophysiology of Glioma Stem Cells in 3D Bioprinted Vascularized Glioblastoma ModelR21NS121945 · NINDS · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI SINGH, IRTISHA · 2022 to 2023
$403k
NCI NIH HHS R01 CA282251NIDCR NIH HHS R01 DE032031NINDS NIH HHS R21 NS121945
6 · The paper itself

Abstract

Glioblastoma multiforme (GBM) is a highly aggressive, angiogenic WHO grade IV glioma marked by rapid progression, therapeutic resistance, and poor prognosis. A defining feature of GBM is the presence of glioma stem-like cells (GSCs), which reside in specialized perivascular niches and drive tumor progression, recurrence, and therapeutic resistance. The blood-brain barrier, coupled with the complex and dynamic tumor microenvironment, poses significant challenges for both treatment and mechanistic investigation. Current in vitro GBM models inadequately recapitulate the structural and biochemical cues of the native perivascular niche due to the absence of functional vasculature and brain-mimetic extracellular matrix (ECM), limiting their physiological relevance and predictive power. To address the limitations of existing in vitro GBM models, we developed a patient-derived glioma stem cells (GSC) derived Matrigel spheroid system that transitions into organoids and enables integration into engineered microenvironments. Our model incorporates GSC organoids representing proneural and mesenchymal GBM subtypes, a synthetic engineered extracellular matrix (eECM), and endothelial cells (ECs) seeded on the matrix surface. We evaluated the expression of subtype-specific, pro-angiogenic, stemness, and differentiation markers under increasingly complex co-culture conditions. Our results show that Matrigel-derived GSC spheroids progressively differentiate into organoids over two weeks, with significantly enhanced expression of cell-specific markers in the presence of ECs. Encapsulation of these organoids within eECM, combined with EC co-culture, further promoted cellular invasion and induction of GBM associated genes. This

Indexed as

Engineered extracellular matrixGlioblastoma multiforme (GBM)In vitro modelOrganoidPatient-derived Glioma Stem-like Cells (GSCs)

Identifiers

PMID41000911
PMCPMC12458174

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.