Evidence map›Paper›PMID 41000898›Full record

ArticlebioRxiv : the preprint server for biology2025

Task-Parametrized Dynamics: Representation of Time and Decisions in Recurrent Neural Networks.

Cecilia Jarne, Ryeongkyung Yoon, Tahra Eissa, Zachary P Kilpatrick, Kresimir Josić

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Cecilia JarneUniversidad Nacional de Quilmes, Argentina.ORCID 0000-0002-3917-920X
Ryeongkyung YoonDepartment of Mathematics and Computer Science, Wabash College, Crawfordsville, IN, USA.ORCID 0000-0002-8931-1838
Tahra EissaDepartment of Applied Mathematics, University of Colorado Boulder, Boulder, Colorado, 80309, USA.ORCID 0000-0002-6774-2143
Zachary P KilpatrickDepartment of Applied Mathematics, University of Colorado Boulder, Boulder, Colorado, 80309, USA.ORCID 0000-0002-2835-9416
Kresimir JosićDepartment of Mathematics, University of Houston, Houston, TX, 77204, USA.ORCID 0000-0002-1975-3913

Funding

Anatomical connectivity and activity in primary visual cortex of mouseRF1MH130416 · NIMH · BAYLOR COLLEGE OF MEDICINE · PI PITKOW, ZACHARY SAMUEL, REIMER, JACOB · 2022 to 2022
$1.3M
Cognitive and Neural Strategies for Latent Feature InferenceK99NS127855 · NINDS · UNIVERSITY OF COLORADO · PI EISSA, TAHRA · 2023 to 2024
$261k
NIMH NIH HHS RF1 MH130416NINDS NIH HHS K99 NS127855
6 · The paper itself

Abstract

How do recurrent neural networks (RNNs) internally represent elapsed time to initiate responses after learned delays? To address this question, we trained RNNs on delayed decision-making tasks of increasing complexity: binary decisions, context-dependent decisions, and perceptual integration. We analyzed RNN dynamics after training using eigenvalue spectra, connectivity structure, and population trajectories, and found that 1) distinct dynamical regimes emerge across networks trained on the same task whereby oscillatory dynamics support precise timing, and integration supports evidence accumulation, 2) a population-wide representation of time and decision variables emerges rather than dedicated sub-populations to tracking time and other task-specific variables; and 3) the neural trajectories align only with the output weights near decision points, as shown by trajectory readout correlations, revealing task-driven coordination of precisely timed task representation and readout. These results show that RNNs can use either integration or oscillations to represent time, and highlight how structured connectivity enables diverse solutions to temporal computation problems, consistent with biological principles of degeneracy and functional redundancy.

Indexed as

Decision MakingRNNsSolution DegeneracyTemporal Representation

Identifiers

PMID41000898
PMCPMC12458466

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.