Evidence map›Paper›PMID 40999116›Full record

ArticleWorld journal of microbiology & biotechnology2025

The pentose phosphate pathway is essential for the resistance of Gluconacetobacter diazotrophicus PAL5 to zinc.

Júlia Rosa Moreira, Fabiano Silva Soares, Kariny Marley de Castro Martins, Vivian Ribeiro Pimentel, Luciano de Souza Vespoli, Leandro Fernandes Andrade, Mariana Ramos Leandro, Suzane Ariádina de Souza, Aline Chaves Intorne, Caio Cezar Guedes Corrêa and 2 more

Abstract read
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Article in World journal of microbiology & biotechnology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
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0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Júlia Rosa Moreira *Laboratório de Biotecnologia (Unidade de Biologia Integrativa, Setor de Genômica e Proteômica), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Campos dos Goytacazes, Rio de Janeiro, 28015-622, Brazil.
Fabiano Silva Soares *Laboratório de Biotecnologia (Unidade de Biologia Integrativa, Setor de Genômica e Proteômica), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Campos dos Goytacazes, Rio de Janeiro, 28015-622, Brazil.
Kariny Marley de Castro MartinsLaboratório de Biotecnologia (Unidade de Biologia Integrativa, Setor de Genômica e Proteômica), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Campos dos Goytacazes, Rio de Janeiro, 28015-622, Brazil.
Vivian Ribeiro PimentelLaboratório de Biotecnologia (Unidade de Biologia Integrativa, Setor de Genômica e Proteômica), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Campos dos Goytacazes, Rio de Janeiro, 28015-622, Brazil.
Luciano de Souza VespoliLaboratório de Biotecnologia (Unidade de Biologia Integrativa, Setor de Genômica e Proteômica), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Campos dos Goytacazes, Rio de Janeiro, 28015-622, Brazil.
Leandro Fernandes AndradeLaboratório de Biotecnologia (Unidade de Biologia Integrativa, Setor de Genômica e Proteômica), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Campos dos Goytacazes, Rio de Janeiro, 28015-622, Brazil.
Mariana Ramos LeandroLaboratório de Biotecnologia (Unidade de Biologia Integrativa, Setor de Genômica e Proteômica), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Campos dos Goytacazes, Rio de Janeiro, 28015-622, Brazil.
Suzane Ariádina de SouzaLaboratório de Biotecnologia (Unidade de Biologia Integrativa, Setor de Genômica e Proteômica), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Campos dos Goytacazes, Rio de Janeiro, 28015-622, Brazil.
Aline Chaves IntorneLaboratório de Biotecnologia (Unidade de Biologia Integrativa, Setor de Genômica e Proteômica), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Campos dos Goytacazes, Rio de Janeiro, 28015-622, Brazil.
Caio Cezar Guedes CorrêaLaboratório de Biotecnologia (Unidade de Biologia Integrativa, Setor de Genômica e Proteômica), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Campos dos Goytacazes, Rio de Janeiro, 28015-622, Brazil.
Vanildo SilveiraLaboratório de Biotecnologia (Unidade de Biologia Integrativa, Setor de Genômica e Proteômica), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Campos dos Goytacazes, Rio de Janeiro, 28015-622, Brazil.
Gonçalo Apolinário de Souza FilhoLaboratório de Biotecnologia (Unidade de Biologia Integrativa, Setor de Genômica e Proteômica), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Campos dos Goytacazes, Rio de Janeiro, 28015-622, Brazil. goncalos@uenf.br.

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 315740/2021-3Coordenação de Aperfeiçoamento de Pessoal de Nível Superior 001Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro E26/210.123/2022
6 · The paper itself

Abstract

Zinc (Zn) is an essential metal for the metabolism of bacteria, but in high concentrations, it may be toxic to cells. Gluconacetobacter diazotrophicus is a Gram-negative bacterium characterized by its ability to promote plant growth. Moreover, G. diazotrophicus can survive under challenging conditions, including metal stress. However, the mechanisms that control its resistance to metals require further investigation. This work investigated the main molecular mechanisms associated with the resistance of G. diazotrophicus PAL5 to Zn. Comparative proteomic analyses aimed to identify molecular pathways, and essential proteins were validated by mutagenesis. The main molecular pathways identified by proteomics included response to oxidative stress, sugar metabolism, nutrient uptake, cell envelope metabolism, protein quality control, and the efflux pump system. Mutagenesis showed that the absence of the genes ggt (response to oxidative stress), pgl (sugar metabolism), accC (cell envelope metabolism), tbdR (nutrient uptake), clpX and degP (protein quality control), and czcC (efflux pump system) increased the sensitivity of G. diazotrophicus mutants to Zn. Our results identified essential molecular mechanisms for Zn resistance in G. diazotrophicus, highlighting the essential role of the pentose phosphate pathway.

Indexed as

Drug Resistance, BacterialGluconacetobacterPentose Phosphate PathwayZincBacterial ProteinsGene Expression Regulation, BacterialOxidative StressProteomicsBacterial ProteinsZincMutagenesisPglPlant growth-promoting bacteriaProteomeToxic metal

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.