Evidence map›Paper›PMID 40997319›Full record

ArticleJMIR medical informatics2025

Building a Standardized Cancer Synoptic Report With Semantic and Syntactic Interoperability: Development Study Using SNOMED CT and Fast Healthcare Interoperability Resources (FHIR).

Jieun Hwang, Alexander K Goel, Brian A Rous, George Birdsong, Paul A Seegers, Stefan Dubois, Thomas Rüdiger, Walter S Campbell

Abstract read
In one paragraph

Article in JMIR medical informatics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jieun HwangDepartment of Pathology and Microbiology, University of Nebraska Medical Center, 42nd and Emile, Omaha, NE, 68198, United States, 1 402-559-9593.ORCID 0000-0002-7920-0640
Alexander K GoelTopology Health, Toronto, ON, Canada.ORCID 0000-0002-8672-1292
Brian A RousDepartment of Histopathology, Cambridge University Hospitals NHS Foundation Trust, Cambridge, United Kingdom.ORCID 0000-0002-7619-461X
George BirdsongDepartment of Pathology and Laboratory Medicine, Emory University School of Medicine at Grady Hospital, Atlanta, United States.ORCID 0000-0003-4803-5950
Paul A SeegersPalga Foundation, Houten, The Netherlands.ORCID 0000-0002-7617-415X
Stefan DuboisDepartment of Pathology, Antwerp University Hospital, Edegem, Belgium.ORCID 0009-0007-7192-7881
Thomas RüdigerInstitute of Pathology, Städtisches Klinikum Karlsruhe, Karlsruhe, Germany.ORCID 0000-0002-7095-7567
Walter S CampbellDepartment of Pathology and Microbiology, University of Nebraska Medical Center, 42nd and Emile, Omaha, NE, 68198, United States, 1 402-559-9593.ORCID 0000-0001-7025-2914

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Pathology reports contain critical information necessary for the management of cancer patient care. Efforts to structure pathology cancer reports by the College of American Pathologists and the International Collaboration on Cancer Reporting (ICCR) have been successful in standardizing pathology reports. Likewise, standards development organizations have advanced methods to improve data computability and exchange, by enabling interoperability of pathology cancer reports. Objective: This study aimed to provide a tractable method to render pathology cancer reports computable and interoperable using published cancer reporting protocols, SNOMED Clinical Terms (SNOMED CT) and Health Level 7 (HL7) Fast Healthcare Interoperability Resources (FHIR). Methods: The ICCR colorectal cancer (CRC) reporting dataset (version 1.0) was evaluated by terminologists and pathologists. SNOMED CT concepts were bound to the data elements. The dataset was then converted into a FHIR structured data capture (SDC) questionnaire using the United States National Library of Medicine tooling and rendered into a FHIR-conformant message for data exchange. Results: The ICCR CRC dataset contained 216 data elements; 207 data elements were bound to SNOMED CT and incorporated into a FHIR SDC construct. The 9 uncoded data elements were ambiguous and could not be reliably encoded. The resultant FHIR SDC form fully represented the ICCR CRC dataset and rendered these data in an R4 JSON format for data exchange. Conclusions: This study demonstrates a tractable and extensible approach to making cancer pathology reports fully computable and interoperable that can be broadly adopted. ICCR datasets are supported internationally and supported by multiple national pathology societies. These datasets can be fully represented using SNOMED CT to render data elements computable and semantically faithful to their intended meaning. The use of the FHIR SDC construct enables widespread and standardized data exchange of clinical information. While challenges remain, including FHIR adoption and the need to maintain current clinical content and standard terminology, this approach provides a clear pathway toward implementation.

Indexed as

Colorectal NeoplasmsHealth Information InteroperabilityNeoplasmsSystematized Nomenclature of MedicineHumansSemanticsUnited Statesfast healthcare interoperability resourcessemantic interoperabilitySNOMED clinical termsstructured data capturesynoptic pathology reportsyntactic interoperability

Identifiers

PMID40997319
PMCPMC12463337

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.