Evidence map›Paper›PMID 40993776›Full record

ArticleChinese medicine2025

Thermodynamic-driven supramolecular transition from nanofibers to nanospheres: morphology-dependent antibacterial specificity of herb medicines.

Ji-Chang Wei, Xiao-Yu Lin, Yi-Hang Zhao, Xin-Ru Tan, Zhi-Xia Wang, Yuan-Yuan Li, Xue-Mei Huang, Peng-Long Wang

Abstract read
In one paragraph

Article in Chinese medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ji-Chang WeiSchool of Chinese Pharmacy, Beijing University of Chinese Medicine, Beijing, 102488, China.
Xiao-Yu LinSchool of Chinese Pharmacy, Beijing University of Chinese Medicine, Beijing, 102488, China.
Yi-Hang ZhaoSchool of Chinese Pharmacy, Beijing University of Chinese Medicine, Beijing, 102488, China.
Xin-Ru TanSchool of Chinese Pharmacy, Beijing University of Chinese Medicine, Beijing, 102488, China.
Zhi-Xia WangSchool of Chinese Pharmacy, Beijing University of Chinese Medicine, Beijing, 102488, China.
Yuan-Yuan LiShanxi Traditional Chinese Medical Hospital, Taiyuan, 030024, China. yyl_zyy@qq.com.
Xue-Mei HuangSchool of Chinese Pharmacy, Beijing University of Chinese Medicine, Beijing, 102488, China. hxm3928@163.com.
Peng-Long WangSchool of Chinese Pharmacy, Beijing University of Chinese Medicine, Beijing, 102488, China. wpl581@126.com.

Funding

Beijing Municipal Natural Science Foundation 7254503 and 7242221Beijing Municipal Science and Technology Plan Project 20240484578Fundamental Research Funds for the Central Universities 2024-JYB-XJSJJ004, 2023-JYB-JBZD-049, 2022-XJ-KYQD-008 and 2023-JYB-KYPT-17National Natural Science Foundation of China 82474059
6 · The paper itself

Abstract

backgroundScutellariae Radix (SR) and Coptidis Rhizoma (CR) are classic drug pairs used in clinical practice for clearing heat and drying dampness, purging fire for removing toxin. By further studying the mechanism of compatibility of SR and CR from the perspective of thermodynamically driven supramolecular phase transition, we could reveal the interaction between its pharmacodynamic components, and provide scientific basis for improving TCM efficacy.

methodsThe SR-CR and its main components baicalin-berberine (BA-BBR) were taken as the research objects. The morphology of the mechanically mixed samples was characterized by malvern particle size analyzer and scanning electron microscope. UHPLC-Q-Orbitrap HRMS technology was employed to analyze the material basis of each mechanically mixed sample. ITC was used to investigate the effect of temperature on the binding ability between SR and CR. The structural differences of supramolecules in different morphology were explored by molecular dynamics simulation. Finally, in vitro antibacterial models (E. faecium and B. subtilis, S. aureus) were used to evaluate the antibacterial activities of the mechanically mixed samples and non-targeted metabolomics was used to explore the differences in antibacterial mechanisms.

resultsThe mechanical mixtures formed nanofibers (NFs), while heating induced a transition to nanospheres (NPs). Molecular dynamics simulations revealed that enhanced hydrogen bonding and tighter molecular packing under thermal conditions drove this morphological shift. In vitro antibacterial assays and non-targeted metabolomics showed NPs exhibited superior inhibition against Staphylococcus aureus by disrupting amino acid biosynthesis and metabolism, whereas NFs suppressed Bacillus subtilis via physical entanglement and interfered with energy metabolism.

conclusionDriven by thermal energy, the existence form of supramolecules changed from NFs to NPs and the morphology of the formed supramolecules was maintained during their interaction with bacteria, further affected the biological activity.

Indexed as

Antibacterial activityCoptidis RhizomaMorphology transitionScutellariae RadixSupramolecularThermodynamics

Identifiers

PMID40993776
PMCPMC12462035

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.