Evidence map›Paper›PMID 40992406›Full record

ArticleJournal of radiation research2025

Investigation of radiation-induced DNA damage repair-related genes as diagnostic biomarkers for radiation.

Qi Zhang, Yi Yu

Abstract read
In one paragraph

Article in Journal of radiation research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Qi ZhangMedical Administration Department, Zhuji People's Hospital, No. 9 Jianmin Road, Zhuji City 311800, Zhejiang Province, China.
Yi YuRadiology Department, Zhuji Third People's Hospital, No. 12 Guangming Road, Zhuji City 311800, Zhejiang Province, China.ORCID 0009-0009-0612-6783

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Radiation exposure is a significant risk factor for various tumors and illnesses, with early-stage radiation dose closely linked to disease progression. Accurate assessment of radiation exposure is critical for effective treatment. This study aimed to identify radiation-induced DNA damage repair-related genes using weighted gene co-expression network analysis on datasets GSE90909 and GSE102971, supplemented by literature. A protein-protein interaction network was constructed to identify key genes, and their expression levels were compared between irradiated and control groups to evaluate diagnostic efficacy. Immune-related scores were calculated, and correlations between diagnostic genes and immune cells were analyzed. Regulatory networks involving transcription factors (TFs), microRNAs (miRNAs) and key genes were established, alongside gene interaction networks using GeneMANIA. A gene-drug interaction network was also developed. Five key genes-PCNA, REV3L, POLH, LIG1 and XPC-were identified, all significantly overexpressed in irradiated populations. These genes demonstrated strong diagnostic capability for radiation exposure and were positively correlated with radiation dose. Their expression levels were also closely associated with immune cell infiltration, including natural killer cells, plasma cell-like dendritic cells and regulatory T cells. Key regulatory interactions involved TFs (E2F1, TP53) and miRNAs (miR-145, miR-143), while associated genes included FEN1, REV1 and CDKN1A. Drugs linked to these genes included Quercetin and Hydroxyurea. In conclusion, the study identified five key genes with diagnostic potential for radiation exposure, positively correlated with radiation dose. These findings provide a foundation for radiation diagnosis and dose assessment, particularly in populations with later-stage diseases.

Indexed as

DNA DamageDNA RepairBiomarkersDose-Response Relationship, RadiationGene Regulatory NetworksHumansMicroRNAsProtein Interaction MapsBiomarkersMicroRNAsdiagnosisDNA damage repairimmunityradiationregulatory network

Identifiers

PMID40992406
PMCPMC12648068

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.