Evidence map›Paper›PMID 40990490›Full record

ArticlemBio2025

Elucidation of a bacterial pathway for catabolism of the β-β-linked dilignol pinoresinol.

Marco N Allemann, Fachuang Lu, Gerald N Presley, Hannah R Valentino, Diana L Bedgar, Michael A Costa, Syed G A Moinuddin, Christopher C Azubuike, Delyana P Vasileva, Dawn M Klingeman and 10 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in mBio, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Marco N AllemannBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.ORCID 0000-0002-9290-7296
Fachuang LuGreat Lakes Bioenergy Research Center, Wisconsin Energy Institute, University of Wisconsin, Madison, Wisconsin, USA.ORCID 0000-0002-8230-9129
Gerald N PresleyBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.ORCID 0000-0002-5506-7419
Hannah R ValentinoBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.ORCID 0009-0008-3117-3541
Diana L BedgarInstitute of Biological Chemistry, Washington State University, Pullman, Washington, USA.
Michael A CostaInstitute of Biological Chemistry, Washington State University, Pullman, Washington, USA.ORCID 0009-0006-8638-2151
Syed G A MoinuddinInstitute of Biological Chemistry, Washington State University, Pullman, Washington, USA.ORCID 0000-0002-9907-416X
Christopher C AzubuikeBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.ORCID 0000-0002-2376-3057
Delyana P VasilevaBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.ORCID 0000-0002-7919-7883
Dawn M KlingemanBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.ORCID 0000-0002-4307-2560
Leah H HochanadelBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.
Alexander R FischBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.ORCID 0000-0001-5492-4864
Brian C SandersBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.ORCID 0000-0001-9754-1687
Lindsay D EltisDepartment of Microbiology and Immunology, The University of British Columbia, Vancouver, British Columbia, Canada.ORCID 0000-0002-6774-8158
Richard J GiannoneBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.ORCID 0000-0001-8551-0138
Laurence B DavinInstitute of Biological Chemistry, Washington State University, Pullman, Washington, USA.ORCID 0000-0002-3248-6485
Norman G LewisInstitute of Biological Chemistry, Washington State University, Pullman, Washington, USA.ORCID 0000-0001-5742-032X
John RalphGreat Lakes Bioenergy Research Center, Wisconsin Energy Institute, University of Wisconsin, Madison, Wisconsin, USA.ORCID 0000-0002-6093-4521
James G ElkinsBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.ORCID 0000-0002-8052-5688
Joshua K MichenerBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.ORCID 0000-0003-2302-8180

Funding

National Institute of Food and Agriculture WNP7003632U.S. Department of Energy DE-SC0018409U.S. Department of Energy ERKP886U.S. Department of Energy ERPK971
6 · The paper itself

Abstract

Monolignol-derived dimers containing β-β linkages are synthesized by vascular plants and can be released during lignin depolymerization. In this work, we isolated a bacterium,

Indexed as

FuransLignansMetabolic Networks and PathwaysSphingomonadaceaeLigninFuransLignansLigninpinoresinolligninNovosphingobiumpinoresinol

Identifiers

PMID40990490
PMCPMC12607616

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.