Evidence map›Paper›PMID 40989939›Full record

ArticleClinical and experimental gastroenterology2025

Colonic Mucosal Gene Expression Profile in Patients with Neoplastic Progression in Longstanding Ulcerative Colitis.

Lene Alsøe, Stephan Andreas Brackmann, Yohan Lefol, Anna Berit Wennerström, Yan Liu, Rosa Ana Risques, Solveig Norheim Andersen, Hilde Loge Nilsen

Abstract read
In one paragraph

Article in Clinical and experimental gastroenterology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Lene Alsøe *Department of Microbiology, Oslo University Hospital, Oslo, Norway.ORCID 0000-0002-8711-8479
Stephan Andreas Brackmann *Institute of Clinical Medicine, University of Oslo, Oslo, Norway.
Yohan LefolInstitute of Clinical Medicine, University of Oslo, Oslo, Norway.
Anna Berit WennerströmDepartment of Clinical Molecular Biology, Akershus University Hospital, Lørenskog, Norway.ORCID 0000-0001-8143-9944
Yan LiuDepartment of Clinical Molecular Biology, Akershus University Hospital, Lørenskog, Norway.
Rosa Ana RisquesDepartment of Laboratory Medicine and Pathology, University of Washington, Seattle, WA, USA.
Solveig Norheim AndersenInstitute of Clinical Medicine, University of Oslo, Oslo, Norway.
Hilde Loge NilsenDepartment of Microbiology, Oslo University Hospital, Oslo, Norway.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: Long-standing mucosal inflammation is suspected to be one of the main drivers of colitis-associated colorectal cancer (CA-CRC), but far from all colitis patients develop cancer. Non-neoplastic mucosa located distant from neoplastic lesions may harbour early molecular events of carcinogenesis. We hypothesise that patients with UC who have progressed to neoplasia (progressors) exhibit a distinct molecular profile of mucosal inflammation from non-progressors. Patients and Methods: We performed transcriptomic profiling of 143 mucosal biopsies from non-neoplastic colonic segments of 14 UC progressors and 30 UC non-progressors using the Agilent SurePrint G3 human gene expression 60K microarray. Subsequently, we carried out gene set ontology analyses. In addition, we assessed lymphocyte infiltration to the mucosa of biopsies taken adjacent to biopsies used for transcriptomic analysis by immunohistochemistry. Results: Adjusting for molecular alterations associated with long disease duration, our findings revealed that UC Progressors' inflamed mucosa has a distinct gene expression profile of 529 significantly deregulated genes, eg Conclusion: The inflamed colonic mucosa from UC patients who have progressed to dysplasia or cancer has a different gene expression profile than that of UC non-progressors, suggesting lower levels of lymphoid organ-initiating and immune cell-attracting signals and fewer infiltrating immune cells to the mucosa. Consequently, progressors may lack the ability to mount sufficient adaptive immune responses necessary to counteract driving forces of malignant transformation in UC.

Indexed as

colitis-associated neoplasmsgene expression profilinginflammatory bowel diseasesulcerative colitis

Identifiers

PMID40989939
PMCPMC12452970

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.