Evidence map›Paper›PMID 40988344›Full record

ArticleThe plant genome2025

Untargeted metabolomics reveals key metabolites and genes underlying salinity tolerance mechanisms in maize.

Manwinder S Brar, Amancio De Souza, Avineet Ghai, Jorge F S Ferreira, Devinder Sandhu, Rajandeep S Sekhon

Abstract read
In one paragraph

Article in The plant genome, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Manwinder S BrarDepartment of Genetics and Biochemistry, Clemson University, Clemson, South Carolina, USA.ORCID https://orcid.org/0009-0008-1600-4520
Amancio De SouzaMetabolomics core facility, Institute for Integrative Genome Biology, University of California, Riverside, California, USA.
Avineet GhaiDepartment of Natural and Agricultural Sciences, University of California Riverside, Riverside, California, USA.ORCID https://orcid.org/0009-0005-3442-3989
Jorge F S FerreiraUSDA-ARS, US Salinity Lab, Riverside, California, USA.ORCID https://orcid.org/0000-0003-4550-6761
Devinder SandhuUSDA-ARS, US Salinity Lab, Riverside, California, USA.ORCID https://orcid.org/0000-0003-4193-3408
Rajandeep S SekhonDepartment of Genetics and Biochemistry, Clemson University, Clemson, South Carolina, USA.ORCID https://orcid.org/0000-0002-5420-2703

Funding

National Science Foundation (NSF) Office of Experimental Program to Stimulate Competitive Research (EPSCoR) 1826715USDA Agricultural Research Service 2036-13210-013-000D
6 · The paper itself

Abstract

Understanding the physiological, metabolic, and genetic mechanisms underlying salt tolerance is essential for improving crop resilience and productivity, yet their complex interactions remain poorly defined. We compared physiological and metabolic responses to salinity between two contrasting maize (Zea mays L.) inbred lines: the salt-sensitive C68 and the salt-tolerant NC326. The sensitivity of C68 was characterized by reduced shoot and root dry weights and plant height, high tissue accumulation of Na and Cl but low K, and lower leaf proline accumulation compared to the salt-tolerant NC326. Untargeted metabolomics identified 56 metabolites categorized as constitutively upregulated or salt-responsive. In NC326, constitutive accumulation of flavonoids, including schaftoside, tricin, and kaempferol-related compounds in leaves, suggests adaptive priming against oxidative stress, while constitutively higher lipids and fatty acids in roots may enhance membrane stability. Salt-responsive metabolites, notably antioxidants and lanosterol, highlighted inducible oxidative-stress mitigation and membrane-stabilization strategies. By integrating metabolomic and genetic analyses, we identified 10 candidate genes involved in the biosynthesis of key metabolites. These findings establish a comprehensive platform for functional validation of metabolites and candidate genes for developing maize varieties with improved resilience to soil salinity through targeted breeding or biotechnological strategies.

Indexed as

MetabolomeSalt ToleranceZea maysGene Expression Regulation, PlantGenes, PlantMetabolomicsPlant Roots

Identifiers

PMID40988344
PMCPMC12457813

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.