Evidence map›Paper›PMID 40987898›Full record

ArticleEMBO reports2025

Progressive chromosome shape changes during cell divisions.

Yasutaka Kakui, Yoshiharu Kusano, Tereza Clarence, Maya Lopez, Todd Fallesen, Toru Hirota, Bhavin S Khatri, Frank Uhlmann

Abstract read
In one paragraph

Article in EMBO reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yasutaka KakuiWaseda Institute for Advanced Study, Waseda University, Tokyo, 169-0051, Japan.ORCID 0000-0003-2066-232X
Yoshiharu KusanoDivision of Experimental Pathology, Cancer Institute of the Japanese Foundation for Cancer Research, Tokyo, 135-8550, Japan.ORCID 0000-0002-9806-5077
Tereza ClarenceIcahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Maya LopezChromosome Segregation Laboratory, The Francis Crick Institute, London, NW1 1AT, UK.ORCID 0009-0006-4806-1103
Todd FallesenAdvanced Light Microscopy Science Technology Platform, The Francis Crick Institute, London, NW1 1AT, UK.ORCID 0000-0002-8700-3700
Toru HirotaDivision of Experimental Pathology, Cancer Institute of the Japanese Foundation for Cancer Research, Tokyo, 135-8550, Japan.ORCID 0000-0001-7064-9065
Bhavin S KhatriDepartment of Life Sciences, Imperial College London, Silwood Park Campus, Ascot, SL5 7PY, UK. b.khatri@imperial.ac.uk.ORCID 0000-0002-0312-336X
Frank UhlmannChromosome Segregation Laboratory, The Francis Crick Institute, London, NW1 1AT, UK. frank.uhlmann@crick.ac.uk.ORCID 0000-0002-3527-6619

Funding

Japan Society for the Promotion of Science London (JSPS) 22H04996 and 24H02283Japan Society for the Promotion of Science London (JSPS) 22K06092Waseda University grants for Special Research Projects 2021C-387,2022C-306,2023C-283,2024C-285Wellcome TrustWellcome Trust cc2137Wellcome Trust (WT) 220244/Z/20/Z
6 · The paper itself

Abstract

Mitotic chromosomes give genome portions the required compaction and mechanical stability for faithful inheritance during cell divisions. They are shaped by the chromosomal condensin complex. Here, we record human chromosome dimensions from their appearance in prophase over successive times in a mitotic arrest. Chromosomes first appear long and uniformly thin. Then, individual chromosome arms become discernible, which continuously shorten and thicken-the longer a chromosome arm, the thicker it becomes. In the search for a molecular explanation of this behavior, given uniform condensin density, the popular loop extrusion model provides no obvious means by which longer chromosome arms become thicker. Instead, we find that simulations of an alternative loop capture model recapitulate key features of our observations, with re-arranging chromatin rosettes underpinning the gradually developing arm length-to-width relationship. Our analyses portray chromosomes as out-of-equilibrium structures in the process of transitioning towards, but on biologically relevant time scales not typically reaching, steady state.

Indexed as

Cell DivisionChromosomesChromosomes, HumanAdenosine TriphosphatasesChromatinDNA-Binding ProteinsHumansMitosisMultiprotein ComplexesProphaseAdenosine TriphosphatasesChromatincondensin complexesDNA-Binding ProteinsMultiprotein ComplexesChromosome FormationCondensinLoop CaptureLoop ExtrusionPolymer Simulations

Identifiers

PMID40987898
PMCPMC12592473

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.