Evidence map›Paper›PMID 40986522›Full record

ArticlePLoS computational biology2025

Ten quick tips for protecting health data using de-identification and perturbation of structured datasets.

Tshikala Eddie Lulamba, Themba Mutemaringa, Nicki Tiffin

Abstract read
In one paragraph

Article in PLoS computational biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Tshikala Eddie LulambaSouth African National Bioinformatics Institute, University of the Western Cape, Bellville, South Africa.
Themba MutemaringaSouth African National Bioinformatics Institute, University of the Western Cape, Bellville, South Africa.ORCID 0000-0003-2857-7197
Nicki TiffinSouth African National Bioinformatics Institute, University of the Western Cape, Bellville, South Africa.ORCID 0000-0001-5083-2735

Funding

Bill & Melinda Gates Foundation
6 · The paper itself

Abstract

Structured patient data generated within the health data ecosystem are shared both internally for operational use and also externally for research and public health benefit. Protecting individual privacy and health data confidentiality in these contexts relies on data de-identification and anonymisation, although there are no universally accepted standards for these processes and the techniques involved can be technically complex. We present practical recommendations grounded in the principle of data minimisation-avoiding unnecessary granularity and identifying variables that could lead to re-identification when combined with other datasets. We provide practical guidance for anonymising and perturbing structured health data in ways that support compliance with data protection laws, describing technical and operational methods for reducing re-identification risk that include rounding numerical values, replacing precise values with ranges, adding jitter to numeric fields, aggregating data, management of date values and separating sensitive fields from identifying data to prevent linkage leading to re-identification. While some methods require advanced technical knowledge, we focus here on accessible strategies that can be implemented without specialist expertise, recognising the importance of the legal and governance frameworks in which anonymisation occurs. These guidelines support researchers, data managers and institutions in sharing health data responsibly, maintaining data utility while upholding privacy and promoting ethical and legal data stewardship for data-driven health research.

Indexed as

Computer SecurityConfidentialityData AnonymizationComputational BiologyElectronic Health RecordsHumans

Identifiers

PMID40986522
PMCPMC12456793

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.