Evidence map›Paper›PMID 40985796›Full record

ArticleHuman brain mapping2025

Comprehensive Segmentation of Deep Grey Nuclei From Structural MRI Data.

Manojkumar Saranathan, Giuseppina Cogliandro, Thomas Hicks, Dianne Patterson, Behroze Vachha, Asma Hader, Mohammed Salman Shazeeb, Alberto Cacciola

Abstract read
In one paragraph

Article in Human brain mapping, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. A deep learning framework for comprehensive segmentation of deep grey nuclei.medRxiv : the preprint server for health sciences · 2025
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Manojkumar SaranathanDepartment of Radiology, UMass Chan Medical School, Worcester, Massachusetts, USA.ORCID 0000-0001-9020-9948
Giuseppina CogliandroBrain Mapping Lab, Department of Biomedical, Dental Sciences and Morphological and Functional Imaging, University of Messina, Messina, Italy.
Thomas HicksUniversity of Arizona, Tucson, Arizona, USA.
Dianne PattersonUniversity of Arizona, Tucson, Arizona, USA.
Behroze VachhaDepartment of Radiology, UMass Chan Medical School, Worcester, Massachusetts, USA.
Asma HaderDepartment of Radiology, UMass Chan Medical School, Worcester, Massachusetts, USA.
Mohammed Salman ShazeebDepartment of Radiology, UMass Chan Medical School, Worcester, Massachusetts, USA.
Alberto CacciolaBrain Mapping Lab, Department of Biomedical, Dental Sciences and Morphological and Functional Imaging, University of Messina, Messina, Italy.ORCID 0000-0001-9412-4116

Funding

Mapping the Human Connectome: Structure, Function, and HeritabilityU54MH091657 · NIMH · WASHINGTON UNIVERSITY · PI UGURBIL, KAMIL, VAN ESSEN, DAVID C · 2010 to 2014
$34.7M
Next-Generation Thalamic Nuclei Visualization and Segmentation MethodsR01EB032674 · NIBIB · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI Manojkumar Saranathan · 2022 to 2026
$1.8M
NIBIB NIH HHS EB032674NIBIB NIH HHS R01 EB032674NIMH NIH HHS U54 MH091657
6 · The paper itself

Abstract

There is a lack of tools for comprehensive and complete segmentation of deep grey nuclei using a single software for reproducibility and repeatability. We present a fast, accurate, and robust method for segmentation of deep grey nuclei (thalamic nuclei, basal ganglia, amygdala, claustrum, and red nucleus) from structural T

Indexed as

Gray MatterImage Processing, Computer-AssistedMagnetic Resonance ImagingNeuroimagingAdultAmygdalaBasal GangliaClaustrumFemaleHumansMaleRed NucleusReproducibility of ResultsThalamic NucleiWhite Matter

Identifiers

PMID40985796
PMCPMC12455863

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.