Evidence map›Paper›PMID 40985769›Full record

ArticleNucleic acids research2025

Reactive sulfur species mediated persulfidation cascade regulation mechanism of novel transcription factor SscRAc in extremophile Acidithiobacillus caldus under extreme copper stress.

Xingyu Huo, Yanjun Tong, Mingwei Wang, Ruian Ji, Yiwen Zhu, Hailin Yang, Shoushuai Feng

Abstract read
In one paragraph

Article in Nucleic acids research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Xingyu HuoKey Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, Jiangsu 214122, PR China.ORCID 0009-0005-7533-4413
Yanjun TongState Key Laboratory of Food Science and Resources, School of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu 214122, PR China.
Mingwei WangKey Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, Jiangsu 214122, PR China.
Ruian JiKey Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, Jiangsu 214122, PR China.
Yiwen ZhuKey Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, Jiangsu 214122, PR China.
Hailin YangKey Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, Jiangsu 214122, PR China.
Shoushuai FengKey Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, Jiangsu 214122, PR China.ORCID 0000-0001-6696-7095

Funding

Basic Research Program of JiangsuJiangsu Basic Research Center for Synthetic Biology BK20233003National Key Research and Development Program of China 2022YFC3401304/001National Natural Science Foundation of China 21878128National Natural Science Foundation of China 31701582National Natural Science Foundation of China 32371540National Natural Science Foundation of China 32471540
6 · The paper itself

Abstract

Severe environmental conditions enhance the resilience of biomining microorganisms to elevated metal ion concentrations. The mechanism of how biomining microorganisms resist metal ions is poorly understood. We identified a novel reactive sulfur species (RSS)-sensitive MarR family transcription factor (SscRAc) in Acidithiobacillus caldus by persulfidation proteomics and observed increase in RSS and protein persulfidation levels under 250 mM Cu2+ stress. The deletion of sscRAc gene via CRISPR-Cas9 and conjugative transfer technology enhanced copper sensitivity in A. caldus. ChIP-seq/qRT-PCR revealed that SscRAc regulates copper detoxification by blocking efflux pumps and stimulating RSS metabolism. LC-MS/MS analysis revealed that both Cys74 and Cys78 in SscRAc interact with RSS and undergo persulfidation, resulting in the dissociation of the protein from the promoter-DNA of target genes. Upstream signaling analysis indicated that copper-sensitive repressor CsoRAc, regulated by SscRAc, inversely regulates SscRAc, thereby jointly enabling copper-RSS signal transduction. In conclusion, we identify SscRAc as the first RSS-dependent transcriptional switch directly linking copper toxicity with the persulfidation signaling pathway in extremophiles.

Indexed as

AcidithiobacillusBacterial ProteinsCopperSulfurTranscription FactorsExtremophilesGene Expression Regulation, BacterialPromoter Regions, GeneticSignal TransductionStress, PhysiologicalBacterial ProteinsCopperSulfurTranscription Factors

Identifiers

PMID40985769
PMCPMC12455602

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.