Evidence map›Paper›PMID 40984680›Full record

ArticleAging cell2025

Aging Reduces Intestinal Stem Cell Activity in Killifish and Intermittent Fasting Reverses Intestinal Gene Expression Patterns.

Michael Kothmayer, Sylvia Laffer, Philipp Widmayer, Elmar E Ebner, Fehima Ugarak, David Martin, Stefan H Geyer, Kareem Elsayad, Wolfgang J Weninger, Sabine Lagger and 3 more

Abstract read
In one paragraph

Article in Aging cell, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Michael KothmayerDivision of Cell and Developmental Biology, Center for Anatomy and Cell Biology, Medical University of Vienna, Vienna, Austria.
Sylvia LafferDivision of Cell and Developmental Biology, Center for Anatomy and Cell Biology, Medical University of Vienna, Vienna, Austria.
Philipp WidmayerDivision of Cell and Developmental Biology, Center for Anatomy and Cell Biology, Medical University of Vienna, Vienna, Austria.
Elmar E EbnerDivision of Cell and Developmental Biology, Center for Anatomy and Cell Biology, Medical University of Vienna, Vienna, Austria.ORCID 0000-0002-2630-4809
Fehima UgarakDivision of Anatomy, Center for Anatomy and Cell Biology, Medical University of Vienna, Vienna, Austria.ORCID 0000-0002-7704-2140
David MartinUnit of Laboratory Animal Pathology, Center of Pathobiology, University of Veterinary Medicine Vienna, Vienna, Austria.
Stefan H GeyerDivision of Anatomy, Center for Anatomy and Cell Biology, Medical University of Vienna, Vienna, Austria.
Kareem ElsayadDivision of Anatomy, Center for Anatomy and Cell Biology, Medical University of Vienna, Vienna, Austria.
Wolfgang J WeningerDivision of Anatomy, Center for Anatomy and Cell Biology, Medical University of Vienna, Vienna, Austria.
Sabine LaggerUnit of Laboratory Animal Pathology, Center of Pathobiology, University of Veterinary Medicine Vienna, Vienna, Austria.
Klara WeipoltshammerDivision of Cell and Developmental Biology, Center for Anatomy and Cell Biology, Medical University of Vienna, Vienna, Austria.
Oliver PuschDivision of Cell and Developmental Biology, Center for Anatomy and Cell Biology, Medical University of Vienna, Vienna, Austria.
Christian SchöferDivision of Cell and Developmental Biology, Center for Anatomy and Cell Biology, Medical University of Vienna, Vienna, Austria.ORCID 0000-0001-9570-5692

Funding

Austrian Science Fund P30642-b28Austrian Science Fund P34191
6 · The paper itself

Abstract

The process of aging is associated with a decline in cell, tissue, and organ function, leading to a range of health problems. Increasing evidence indicates that dietary restriction can counteract age-dependent effects and improve health and longevity in whole organisms, but less is known about the influence of aging and the impact of nutrition on individual organs of an organism. In this study, we examined the intestine of the very short-lived aging model system, the African turquoise killifish (Nothobranchius furzeri), throughout its lifetime. We investigated the effects of age and nutrition on the preservation of gut tissue at stages corresponding to human neonatal, adolescent, adult, and old age, and integrated morphological measurements, histology, and transcriptomics. The intestinal mucosa is characterized by folds and intervening interfold regions, where intestinal stem cells localize. The stem cells occur in clusters, and the cycle time of stem cells increases with age. We also observed a reduction in intestinal length and volume with age. Age-dependent transcriptomic profiling revealed significant changes in the expression of peripheral circadian clock genes and stem cell niche markers. Notably, the majority of these genes maintained their adult gene expression levels in old age following intermittent fasting during adulthood. Therefore, our results demonstrate that the decline in structural intestinal tissue homeostasis is associated with a decline in stem cell activity that can be counteracted by intermittent fasting. Since the intestinal mucosa of killifish is similar to that of mammals, the results of this study can be translated to general gut biology.

Indexed as

AgingFastingFundulidaeIntestinal MucosaIntestinesStem CellsAnimalsHumansIntermittent FastingTranscriptomeagingintestinal stem cellskillifishnutritionrejuvenationsenescencestomach

Identifiers

PMID40984680
PMCPMC12611280

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.