Evidence map›Paper›PMID 40983859›Full record

ArticleMedical & biological engineering & computing2026

Enhancing AI-based decision support system with automatic brain tumor segmentation for EGFR mutation classification.

Neslihan Gökmen, Ozan Kocadağlı, Serdar Cevik, Cagdas Aktan, Reza Eghbali, Chunlei Liu

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Article in Medical & biological engineering & computing, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Neslihan GökmenCollege of Engineering, Computer Engineering Department, Koç University, Istanbul, Türkiye.
Ozan KocadağlıFaculty of Science and Letters, Department of Statistics, Mimar Sinan Fine Arts University, Silahsör Cad. No. 71, Bomonti/Sisli, 34380, Istanbul, Türkiye. ozan.kocadagli@msgsu.edu.tr.ORCID http://orcid.org/0000-0003-4354-7383
Serdar CevikDepartment of Neurosurgery, Istanbul Kanuni Sultan Süleyman Health Application and Research Center, Health Sciences University, Istanbul, Türkiye.
Cagdas AktanFaculty of Medicine, Department of Medical Biology, Bandırma Onyedi Eylül University, Balıkesir, Türkiye.
Reza EghbaliInstitute for Data Science, University of California, Berkeley, CA, USA.
Chunlei LiuInstitute for Data Science, University of California, Berkeley, CA, USA.

Funding

TUBİTAK 124E170
6 · The paper itself

Abstract

Glioblastoma (GBM) carries poor prognosis; epidermal-growth-factor-receptor (EGFR) mutations further shorten survival. We propose a fully automated MRI-based decision-support system (DSS) that segments GBM and classifies EGFR status, reducing reliance on invasive biopsy. The segmentation module (UNet SI) fuses multiresolution, entropy-ranked shearlet features with CNN features, preserving fine detail through identity long-skip connections, to yield a Lightweight 1.9 M-parameter network. Tumour masks are fed to an Inception ResNet-v2 classifier via a 512-D bottleneck. The pipeline was five-fold cross-validated on 98 contrast-enhanced T1-weighted scans (Memorial Hospital; Ethics 24.12.2021/008) and externally validated on BraTS 2019. On the Memorial cohort UNet SI achieved Dice 0.873, Jaccard 0.853, SSIM 0.992, HD95 24.19 mm. EGFR classification reached Accuracy 0.960, Precision 1.000, Recall 0.871, AUC 0.94, surpassing published state-of-the-art results. Inference time is ≤ 0.18 s per slice on a 4 GB GPU. By combining shearlet-enhanced segmentation with streamlined classification, the DSS delivers superior EGFR prediction and is suitable for integration into routine clinical workflows.

Indexed as

Artificial IntelligenceBrain NeoplasmsErbB ReceptorsGlioblastomaMutationFemaleHumansMagnetic Resonance ImagingMaleEGFR protein, humanErbB ReceptorsAutomatic segmentationBrain tumoursDeep learningEGFR mutationGlioblastoma

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.