Evidence map›Paper›PMID 40982796›Full record

ArticleJMIR AI2025

Developing a Tool for Identifying Clinical Risk From Free-Text Clinical Records: Natural Language Processing Study.

Natasha Biscoe, Daniel Leightley, Dominic Murphy

Abstract read
In one paragraph

Article in JMIR AI, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Natasha BiscoeCombat Stress Centre for Applied Military Health Research, Leatherhead, United Kingdom.ORCID https://orcid.org/0000-0003-3471-6472
Daniel LeightleyKing's College London, King's Centre for Military Health Research, London, United Kingdom.ORCID https://orcid.org/0000-0001-9512-752X
Dominic MurphyCombat Stress Centre for Applied Military Health Research, Leatherhead, United Kingdom.ORCID https://orcid.org/0000-0002-9530-2743

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundElectronic patient records are a valuable yet underused data source; they have been explored in research using natural language processing, but not yet within a third-sector organization.

objectiveThis study aimed to apply natural language processing to develop a risk identification tool capable of discerning high and low suicide risk among veterans, using electronic patient records from a United Kingdom-based veteran mental health charity.

methodsA total of 20,342 notes were extracted for this purpose. To develop the risk tool, 70% of the records formed the training dataset, while the remaining 30% were allocated for testing and evaluation. The classification framework was devised and trained to categorize risk as a binary outcome: 1 indicating high risk and 0 indicating low risk.

resultsThe efficacy of each classifier model was assessed by comparing its results with those from clinical risk assessments. A logistic regression classifier was found to perform best and was used to develop the final model. This comparison allowed for the calculation of the positive predictive value (mean 0.74, SD 0.059; 95% CI 0.70-0.77), negative predictive value (mean 0.73, SD 0.024; 95% CI 0.72-0.75), sensitivity (mean 0.75, SD 0.017; 95% CI 0.74-0.76), F

conclusionsThe risk identification tool successfully determined the correct risk category of veterans from a large sample of clinical notes. Future studies should investigate whether this tool can detect more nuanced differences in risk and be generalizable across data sources.

Indexed as

electronic patient recordsnatural language processingriskself-harmveterans

Identifiers

PMID40982796
PMCPMC12501529

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.