Evidence map›Paper›PMID 40982463›Full record

ArticlePloS one2025

Surface protein glycosylation conserved in the human pathogen Mycoplasma genitalium and retained in the synthetic organism JCVI-Syn3A.

John William Sanford, James Mobley, Kevin Dybvig, Thomas Prescott Atkinson, James Michael Daubenspeck

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

John William SanfordDepartment of Pediatrics, University of Alabama at Birmingham, Birmingham, Alabama, United States of America.ORCID https://orcid.org/0000-0003-0301-3088
James MobleyDepartment of Anesthesiology and Perioperative Medicine, University of Alabama at Birmingham, Birmingham, Alabama, United States of America.
Kevin DybvigDepartment of Pediatrics, University of Alabama at Birmingham, Birmingham, Alabama, United States of America.
Thomas Prescott AtkinsonDepartment of Pediatrics, University of Alabama at Birmingham, Birmingham, Alabama, United States of America.
James Michael DaubenspeckDepartment of Pediatrics, University of Alabama at Birmingham, Birmingham, Alabama, United States of America.ORCID https://orcid.org/0009-0008-9335-3556

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein glycosylation has been reported in all forms of life. The genus Mycoplasma is composed of highly genome-streamlined bacterial symbionts, making them model organisms for investigating minimal genome concepts. Previous work from our group showed mycoplasmas scavenge hexoses from exogenous oligosaccharides to glycosylate surface proteins at serine, threonine, asparagine, and glutamine residues without utilizing a consensus sequence as seen in canonical glycosylation systems. We report here that this surface protein hexosylation system is conserved in Mycoplasma genitalium, a human urogenital pathogen with a 580-kbp genome that can be cultured axenically. We also report this modification is found in the ruminant pathogen Mycoplasma mycoides subsp. capri and is conserved in JCVI-Syn3A, a nonpathogenic mycoplasma with a synthetic minimal M. mycoides genome containing genes that are essential for survival and robust growth under axenic culture conditions. In contrast to known glycoproteins, we have detected evidence of glycosylation of aspartic acid and glutamic acid residues, which expands the pool of potential glycosyl acceptors in bacteria to include the acidic amino acids.

Indexed as

Bacterial ProteinsMembrane ProteinsMycoplasma genitaliumAspartic AcidGenome, BacterialGlutamic AcidGlycosylationMycoplasma mycoidesSynthetic BiologyAspartic AcidBacterial ProteinsGlutamic AcidMembrane Proteins

Identifiers

PMID40982463
PMCPMC12453214

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.