Evidence map›Paper›PMID 40982458›Full record

ArticlePloS one2025

Comparative maxicircle analysis in Trypanosoma species from the LSRM clade highlights patterns in an underexplored lineage.

Fanny Rusman, Valeria Aramayo, Noelia Floridia-Yapur, Anahí Guadalupe Díaz, Tatiana Ponce, Soledad Hodi, Juan José Aguirre, Gonzalo Greif, Luisa Berná, Carlos Robello and 2 more

Abstract readComparative Study
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Fanny RusmanInstituto de Patología Experimental - Dr. Miguel Ángel Basombrío IPE-CONICET, Salta, Argentina.
Valeria AramayoInstituto de Patología Experimental - Dr. Miguel Ángel Basombrío IPE-CONICET, Salta, Argentina.ORCID 0009-0005-7597-9158
Noelia Floridia-YapurInstituto de Patología Experimental - Dr. Miguel Ángel Basombrío IPE-CONICET, Salta, Argentina.
Anahí Guadalupe DíazInstituto de Patología Experimental - Dr. Miguel Ángel Basombrío IPE-CONICET, Salta, Argentina.
Tatiana PonceInstituto de Patología Experimental - Dr. Miguel Ángel Basombrío IPE-CONICET, Salta, Argentina.
Soledad HodiInstituto de Patología Experimental - Dr. Miguel Ángel Basombrío IPE-CONICET, Salta, Argentina.
Juan José AguirreInstituto de Patología Experimental - Dr. Miguel Ángel Basombrío IPE-CONICET, Salta, Argentina.
Gonzalo GreifLaboratorio de Interacciones Hospedero-Patógeno - UBM, Institut Pasteur de Montevideo, Montevideo, Uruguay.ORCID 0000-0002-6769-3249
Luisa BernáUnidad de Bioinformática, Institut Pasteur de Montevideo, Montevideo, Uruguay.
Carlos RobelloLaboratorio de Interacciones Hospedero-Patógeno - UBM, Institut Pasteur de Montevideo, Montevideo, Uruguay.
Patricio DiosqueInstituto de Patología Experimental - Dr. Miguel Ángel Basombrío IPE-CONICET, Salta, Argentina.
Nicolás TomasiniInstituto de Patología Experimental - Dr. Miguel Ángel Basombrío IPE-CONICET, Salta, Argentina.ORCID 0000-0002-0518-1942

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trypanosoma lainsoni, Trypanosoma platydactyli, and Trypanosoma scelopori are kinetoplastid flagellates belonging to the LSRM clade of the genus Trypanosoma. These parasites have a unique mitochondrial DNA structure, the kinetoplast, comprising catenated maxicircles and minicircles. However, genetic information on the kinetoplasts of these species remains unknown. In this study, we assembled and analyzed maxicircles from different isolates of T. lainsoni, T. platydactyli, and T. scelopori to address the current gap in genetic information about the LSRM clade and explore their phylogenetic relationships within the Trypanosoma genus. The maxicircle of T. lainsoni isolate Le29, including the coding and divergent regions, was de novo assembled combining Illumina and Oxford Nanopore Technologies, revealing a length of 49,306 bp. Additional isolates of T. lainsoni (Ca37 and Ca47), as well as T. platydactyli and T. scelopori, were sequenced with Illumina, yielding complete coding regions and partial divergent regions for all. As in other trypanosomes, coding regions exhibited conserved synteny in gene order and RNA editing patterns. We found that mRNA editing by U-insertion was higher in T. lainsoni than in T. cruzi, suggesting a partial loss of editing in the latter. Phylogenetic analyses based on the coding region positioned the LSRM clade alongside the Aquatic clade as one of the most ancestral groups within non-salivarian trypanosomes and supported the ancestral position of the Trypanosoma brucei clade, contrasting with previous reports. Finally, analysis of the maxicircle divergent region suggests a gradual transition from long to short repeat structures in non-salivarian trypanosomes. This study provides the first characterization of the T. lainsoni maxicircle and related LSRM clade species. These findings provide new insights into the ancestral relationships within the group, the evolution of the divergent region of the maxicircles and propose RNA editing has been evolving within the genus.

Indexed as

DNA, KinetoplastTrypanosomaAnimalsDNA, MitochondrialPhylogenyRNA EditingDNA, KinetoplastDNA, Mitochondrial

Identifiers

PMID40982458
PMCPMC12453231

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.