Evidence map›Paper›PMID 40981205›Full record

ArticleProteomes2025

Comparative Analysis of Plasma Extracellular Vesicle Isolation Methods for Purity Assessment and Biomarker Discovery.

Alexandra T Star, Melissa Hewitt, Amanpreet Badhwar, Wen Ding, Tammy-Lynn Tremblay, Jennifer J Hill, William G Willmore, Jagdeep K Sandhu, Arsalan S Haqqani

Abstract read
In one paragraph

Article in Proteomes, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Alexandra T StarHuman Health Therapeutics Research Centre, National Research Council of Canada, Ottawa, ON K1A 0R6, Canada.ORCID 0000-0001-9524-4312
Melissa HewittHuman Health Therapeutics Research Centre, National Research Council of Canada, Ottawa, ON K1A 0R6, Canada.
Amanpreet BadhwarCentre de Recherche de l'Institut Universitaire de Gériatrie de Montréal (CRIUGM), Montréal, QC H3W 1W5, Canada.
Wen DingHuman Health Therapeutics Research Centre, National Research Council of Canada, Ottawa, ON K1A 0R6, Canada.
Tammy-Lynn TremblayHuman Health Therapeutics Research Centre, National Research Council of Canada, Ottawa, ON K1A 0R6, Canada.
Jennifer J HillHuman Health Therapeutics Research Centre, National Research Council of Canada, Ottawa, ON K1A 0R6, Canada.ORCID 0000-0003-0031-0706
William G WillmoreDepartments of Biology and Chemistry and the Institute of Biochemistry, Carleton University, Ottawa, ON K1S 5B6, Canada.ORCID 0000-0003-3874-7954
Jagdeep K SandhuHuman Health Therapeutics Research Centre, National Research Council of Canada, Ottawa, ON K1A 0R6, Canada.ORCID 0000-0002-0065-1335
Arsalan S HaqqaniHuman Health Therapeutics Research Centre, National Research Council of Canada, Ottawa, ON K1A 0R6, Canada.

Funding

Natural Sciences and Engineering Research Council DH-2025-00049NRC Ideation New Beginnings Funds INBR1-000202NRC Ideation New Beginnings Funds INBR5-001010
6 · The paper itself

Abstract

backgroundExtracellular vesicles (EVs) are an important source of blood biomarkers and are emerging as next-generation therapeutics. Demonstrating the purity of isolated EVs is essential for applications ranging from proteomics-based biomarker discovery to biomanufacturing. In this study, we systematically evaluated multiple EV isolation methods for plasma and developed a scoring method to identify the approach best suited for proteomics.

methodsCommonly used enrichment techniques, including size-exclusion chromatography (SEC) and precipitation-based methods, were compared against the starting plasma in terms of particle yield and size, proteomic overlap, depletion of abundant plasma proteins, and enrichment of EV markers and unique proteins. To enable rigorous purity assessment, we established a targeted parallel reaction monitoring (PRM) mass spectrometry assay that quantified key EV markers and contaminant proteins across preparations.

resultsAmong the methods tested, SEC showed the greatest enrichment of EV markers and unique proteins, with the lowest level of contaminants, resulting in the highest overall purity scores. SEC also allowed for the detection of EV-free proteins. Other methods, by contrast, performed sub-optimally and were less reliable for proteomics-driven biomarker discovery.

conclusionsSEC provides the most EV-enriched plasma isolates for proteomics information, with minimal contamination from plasma proteins. The PRM-based purity scoring offers an objective means of benchmarking EV preparations and may help standardize EV isolation quality for both biomarker discovery and therapeutic manufacturing.

Indexed as

biomarker discoveryenrichmentextracellular vesiclesplasma proteomicsprotein contaminantspurity assessment

Identifiers

PMID40981205
PMCPMC12452325

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.