Evidence map›Paper›PMID 40980872›Full record

ArticlemSystems2025

Polysaccharide-degrading archaea dominate acidic hot springs: genomic and cultivation insights into a novel

Maria I Prokofeva, Alina I Karaseva, Adolf S Tulenkov, Alexandra A Klyukina, Natalia E Suzina, Nicole J Bale, Anchelique Mets, Christa Schleper, Alexander G Elcheninov, Tatiana V Kochetkova

Abstract read
In one paragraph

Article in mSystems, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
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  5. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Maria I Prokofeva *Federal Research Centre "Fundamentals of Biotechnology" of the Russian Academy of Sciences, Moscow, Russia.
Alina I Karaseva *Federal Research Centre "Fundamentals of Biotechnology" of the Russian Academy of Sciences, Moscow, Russia.
Adolf S TulenkovFederal Research Centre "Fundamentals of Biotechnology" of the Russian Academy of Sciences, Moscow, Russia.
Alexandra A KlyukinaFederal Research Centre "Fundamentals of Biotechnology" of the Russian Academy of Sciences, Moscow, Russia.
Natalia E SuzinaG.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms of the Russian Academy of Sciences, Federal Research Center "Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences", Pushchino, Moscow region, Russia.
Nicole J BaleDepartment of Marine Microbiology and Biogeochemistry, NIOZ Royal Netherlands Institute for Sea Research, Den Burg, the Netherlands.
Anchelique MetsDepartment of Marine Microbiology and Biogeochemistry, NIOZ Royal Netherlands Institute for Sea Research, Den Burg, the Netherlands.
Christa SchleperDepartment of Functional and Evolutionary Ecology, Archaea Biology and Ecogenomics Unit, University of Vienna, Vienna, Austria.ORCID 0000-0002-1918-2735
Alexander G Elcheninov *Federal Research Centre "Fundamentals of Biotechnology" of the Russian Academy of Sciences, Moscow, Russia.
Tatiana V Kochetkova *Federal Research Centre "Fundamentals of Biotechnology" of the Russian Academy of Sciences, Moscow, Russia.ORCID 0000-0003-4794-5960

Funding

Russian Science Foundation 23-14-00312The Ministry of Sciences and Higher Education of the Russian Federation
6 · The paper itself

Abstract

The expansion of sequencing technologies and bioinformatics has greatly advanced our understanding of microbial "dark matter," yet the isolation of pure cultures, especially among Archaea, remains rare and challenging. Cultivation is still essential for the reliable characterization of microbial metabolism, which cannot be fully replaced by metagenomics and other omics-based approaches. Here, we report the first cultivated representatives of a deep-branching archaeal lineage previously known as

Indexed as

ArchaeaHot SpringsPolysaccharidesGenome, ArchaealGenomicsPhylogenyPolysaccharidesarchaeaglycosidasesMarsarchaeotapolysaccharides metabolismTardisphaerathermoacidophile

Identifiers

PMID40980872
PMCPMC12542729

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.