ArticleFrontiers in bioinformatics2025
A novel linear indexing method for strings under all internal nodes in a suffix tree.
Article in Frontiers in bioinformatics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
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Abstract
Suffix trees are fundamental data structures in stringology and have wide applications across various domains. In this work, we propose two linear-time algorithms for indexing strings under each internal node in a suffix tree while preserving the ability to track similarities and redundancies across different internal nodes. This is achieved through a novel tree structure derived from the suffix tree, along with new indexing concepts. The resulting indexes offer practical solutions in several areas, including DNA sequence analysis and approximate pattern matching.
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